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Review of feature selection approaches based on grouping of features
With the rapid development in technology, large amounts of high-dimensional data have been generated. This high dimensionality including redundancy and irrelevancy poses a great challenge in data analysis and decision making. Feature selection (FS) is an effective way to reduce dimensionality by eli...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
PeerJ Inc.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10358338/ https://www.ncbi.nlm.nih.gov/pubmed/37483989 http://dx.doi.org/10.7717/peerj.15666 |
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author | Kuzudisli, Cihan Bakir-Gungor, Burcu Bulut, Nurten Qaqish, Bahjat Yousef, Malik |
author_facet | Kuzudisli, Cihan Bakir-Gungor, Burcu Bulut, Nurten Qaqish, Bahjat Yousef, Malik |
author_sort | Kuzudisli, Cihan |
collection | PubMed |
description | With the rapid development in technology, large amounts of high-dimensional data have been generated. This high dimensionality including redundancy and irrelevancy poses a great challenge in data analysis and decision making. Feature selection (FS) is an effective way to reduce dimensionality by eliminating redundant and irrelevant data. Most traditional FS approaches score and rank each feature individually; and then perform FS either by eliminating lower ranked features or by retaining highly-ranked features. In this review, we discuss an emerging approach to FS that is based on initially grouping features, then scoring groups of features rather than scoring individual features. Despite the presence of reviews on clustering and FS algorithms, to the best of our knowledge, this is the first review focusing on FS techniques based on grouping. The typical idea behind FS through grouping is to generate groups of similar features with dissimilarity between groups, then select representative features from each cluster. Approaches under supervised, unsupervised, semi supervised and integrative frameworks are explored. The comparison of experimental results indicates the effectiveness of sequential, optimization-based (i.e., fuzzy or evolutionary), hybrid and multi-method approaches. When it comes to biological data, the involvement of external biological sources can improve analysis results. We hope this work’s findings can guide effective design of new FS approaches using feature grouping. |
format | Online Article Text |
id | pubmed-10358338 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | PeerJ Inc. |
record_format | MEDLINE/PubMed |
spelling | pubmed-103583382023-07-21 Review of feature selection approaches based on grouping of features Kuzudisli, Cihan Bakir-Gungor, Burcu Bulut, Nurten Qaqish, Bahjat Yousef, Malik PeerJ Bioinformatics With the rapid development in technology, large amounts of high-dimensional data have been generated. This high dimensionality including redundancy and irrelevancy poses a great challenge in data analysis and decision making. Feature selection (FS) is an effective way to reduce dimensionality by eliminating redundant and irrelevant data. Most traditional FS approaches score and rank each feature individually; and then perform FS either by eliminating lower ranked features or by retaining highly-ranked features. In this review, we discuss an emerging approach to FS that is based on initially grouping features, then scoring groups of features rather than scoring individual features. Despite the presence of reviews on clustering and FS algorithms, to the best of our knowledge, this is the first review focusing on FS techniques based on grouping. The typical idea behind FS through grouping is to generate groups of similar features with dissimilarity between groups, then select representative features from each cluster. Approaches under supervised, unsupervised, semi supervised and integrative frameworks are explored. The comparison of experimental results indicates the effectiveness of sequential, optimization-based (i.e., fuzzy or evolutionary), hybrid and multi-method approaches. When it comes to biological data, the involvement of external biological sources can improve analysis results. We hope this work’s findings can guide effective design of new FS approaches using feature grouping. PeerJ Inc. 2023-07-17 /pmc/articles/PMC10358338/ /pubmed/37483989 http://dx.doi.org/10.7717/peerj.15666 Text en ©2023 Kuzudisli et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited. |
spellingShingle | Bioinformatics Kuzudisli, Cihan Bakir-Gungor, Burcu Bulut, Nurten Qaqish, Bahjat Yousef, Malik Review of feature selection approaches based on grouping of features |
title | Review of feature selection approaches based on grouping of features |
title_full | Review of feature selection approaches based on grouping of features |
title_fullStr | Review of feature selection approaches based on grouping of features |
title_full_unstemmed | Review of feature selection approaches based on grouping of features |
title_short | Review of feature selection approaches based on grouping of features |
title_sort | review of feature selection approaches based on grouping of features |
topic | Bioinformatics |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10358338/ https://www.ncbi.nlm.nih.gov/pubmed/37483989 http://dx.doi.org/10.7717/peerj.15666 |
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