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Review of feature selection approaches based on grouping of features

With the rapid development in technology, large amounts of high-dimensional data have been generated. This high dimensionality including redundancy and irrelevancy poses a great challenge in data analysis and decision making. Feature selection (FS) is an effective way to reduce dimensionality by eli...

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Autores principales: Kuzudisli, Cihan, Bakir-Gungor, Burcu, Bulut, Nurten, Qaqish, Bahjat, Yousef, Malik
Formato: Online Artículo Texto
Lenguaje:English
Publicado: PeerJ Inc. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10358338/
https://www.ncbi.nlm.nih.gov/pubmed/37483989
http://dx.doi.org/10.7717/peerj.15666
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author Kuzudisli, Cihan
Bakir-Gungor, Burcu
Bulut, Nurten
Qaqish, Bahjat
Yousef, Malik
author_facet Kuzudisli, Cihan
Bakir-Gungor, Burcu
Bulut, Nurten
Qaqish, Bahjat
Yousef, Malik
author_sort Kuzudisli, Cihan
collection PubMed
description With the rapid development in technology, large amounts of high-dimensional data have been generated. This high dimensionality including redundancy and irrelevancy poses a great challenge in data analysis and decision making. Feature selection (FS) is an effective way to reduce dimensionality by eliminating redundant and irrelevant data. Most traditional FS approaches score and rank each feature individually; and then perform FS either by eliminating lower ranked features or by retaining highly-ranked features. In this review, we discuss an emerging approach to FS that is based on initially grouping features, then scoring groups of features rather than scoring individual features. Despite the presence of reviews on clustering and FS algorithms, to the best of our knowledge, this is the first review focusing on FS techniques based on grouping. The typical idea behind FS through grouping is to generate groups of similar features with dissimilarity between groups, then select representative features from each cluster. Approaches under supervised, unsupervised, semi supervised and integrative frameworks are explored. The comparison of experimental results indicates the effectiveness of sequential, optimization-based (i.e., fuzzy or evolutionary), hybrid and multi-method approaches. When it comes to biological data, the involvement of external biological sources can improve analysis results. We hope this work’s findings can guide effective design of new FS approaches using feature grouping.
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spelling pubmed-103583382023-07-21 Review of feature selection approaches based on grouping of features Kuzudisli, Cihan Bakir-Gungor, Burcu Bulut, Nurten Qaqish, Bahjat Yousef, Malik PeerJ Bioinformatics With the rapid development in technology, large amounts of high-dimensional data have been generated. This high dimensionality including redundancy and irrelevancy poses a great challenge in data analysis and decision making. Feature selection (FS) is an effective way to reduce dimensionality by eliminating redundant and irrelevant data. Most traditional FS approaches score and rank each feature individually; and then perform FS either by eliminating lower ranked features or by retaining highly-ranked features. In this review, we discuss an emerging approach to FS that is based on initially grouping features, then scoring groups of features rather than scoring individual features. Despite the presence of reviews on clustering and FS algorithms, to the best of our knowledge, this is the first review focusing on FS techniques based on grouping. The typical idea behind FS through grouping is to generate groups of similar features with dissimilarity between groups, then select representative features from each cluster. Approaches under supervised, unsupervised, semi supervised and integrative frameworks are explored. The comparison of experimental results indicates the effectiveness of sequential, optimization-based (i.e., fuzzy or evolutionary), hybrid and multi-method approaches. When it comes to biological data, the involvement of external biological sources can improve analysis results. We hope this work’s findings can guide effective design of new FS approaches using feature grouping. PeerJ Inc. 2023-07-17 /pmc/articles/PMC10358338/ /pubmed/37483989 http://dx.doi.org/10.7717/peerj.15666 Text en ©2023 Kuzudisli et al. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited.
spellingShingle Bioinformatics
Kuzudisli, Cihan
Bakir-Gungor, Burcu
Bulut, Nurten
Qaqish, Bahjat
Yousef, Malik
Review of feature selection approaches based on grouping of features
title Review of feature selection approaches based on grouping of features
title_full Review of feature selection approaches based on grouping of features
title_fullStr Review of feature selection approaches based on grouping of features
title_full_unstemmed Review of feature selection approaches based on grouping of features
title_short Review of feature selection approaches based on grouping of features
title_sort review of feature selection approaches based on grouping of features
topic Bioinformatics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10358338/
https://www.ncbi.nlm.nih.gov/pubmed/37483989
http://dx.doi.org/10.7717/peerj.15666
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