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Learning mean-field equations from particle data using WSINDy
We develop a weak-form sparse identification method for interacting particle systems (IPS) with the primary goals of reducing computational complexity for large particle number [Formula: see text] and offering robustness to either intrinsic or extrinsic noise. In particular, we use concepts from mea...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10358825/ https://www.ncbi.nlm.nih.gov/pubmed/37476028 http://dx.doi.org/10.1016/j.physd.2022.133406 |
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author | Messenger, Daniel A. Bortz, David M. |
author_facet | Messenger, Daniel A. Bortz, David M. |
author_sort | Messenger, Daniel A. |
collection | PubMed |
description | We develop a weak-form sparse identification method for interacting particle systems (IPS) with the primary goals of reducing computational complexity for large particle number [Formula: see text] and offering robustness to either intrinsic or extrinsic noise. In particular, we use concepts from mean-field theory of IPS in combination with the weak-form sparse identification of nonlinear dynamics algorithm (WSINDy) to provide a fast and reliable system identification scheme for recovering the governing stochastic differential equations for an IPS when the number of particles per experiment [Formula: see text] is on the order of several thousands and the number of experiments [Formula: see text] is less than 100. This is in contrast to existing work showing that system identification for [Formula: see text] less than 100 and [Formula: see text] on the order of several thousand is feasible using strong-form methods. We prove that under some standard regularity assumptions the scheme converges with rate [Formula: see text] in the ordinary least squares setting and we demonstrate the convergence rate numerically on several systems in one and two spatial dimensions. Our examples include a canonical problem from homogenization theory (as a first step towards learning coarse-grained models), the dynamics of an attractive–repulsive swarm, and the IPS description of the parabolic–elliptic Keller–Segel model for chemotaxis. Code is available at https://github.com/MathBioCU/WSINDy_IPS. |
format | Online Article Text |
id | pubmed-10358825 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
record_format | MEDLINE/PubMed |
spelling | pubmed-103588252023-07-20 Learning mean-field equations from particle data using WSINDy Messenger, Daniel A. Bortz, David M. Physica D Article We develop a weak-form sparse identification method for interacting particle systems (IPS) with the primary goals of reducing computational complexity for large particle number [Formula: see text] and offering robustness to either intrinsic or extrinsic noise. In particular, we use concepts from mean-field theory of IPS in combination with the weak-form sparse identification of nonlinear dynamics algorithm (WSINDy) to provide a fast and reliable system identification scheme for recovering the governing stochastic differential equations for an IPS when the number of particles per experiment [Formula: see text] is on the order of several thousands and the number of experiments [Formula: see text] is less than 100. This is in contrast to existing work showing that system identification for [Formula: see text] less than 100 and [Formula: see text] on the order of several thousand is feasible using strong-form methods. We prove that under some standard regularity assumptions the scheme converges with rate [Formula: see text] in the ordinary least squares setting and we demonstrate the convergence rate numerically on several systems in one and two spatial dimensions. Our examples include a canonical problem from homogenization theory (as a first step towards learning coarse-grained models), the dynamics of an attractive–repulsive swarm, and the IPS description of the parabolic–elliptic Keller–Segel model for chemotaxis. Code is available at https://github.com/MathBioCU/WSINDy_IPS. 2022-11 2022-06-18 /pmc/articles/PMC10358825/ /pubmed/37476028 http://dx.doi.org/10.1016/j.physd.2022.133406 Text en https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) ). |
spellingShingle | Article Messenger, Daniel A. Bortz, David M. Learning mean-field equations from particle data using WSINDy |
title | Learning mean-field equations from particle data using WSINDy |
title_full | Learning mean-field equations from particle data using WSINDy |
title_fullStr | Learning mean-field equations from particle data using WSINDy |
title_full_unstemmed | Learning mean-field equations from particle data using WSINDy |
title_short | Learning mean-field equations from particle data using WSINDy |
title_sort | learning mean-field equations from particle data using wsindy |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10358825/ https://www.ncbi.nlm.nih.gov/pubmed/37476028 http://dx.doi.org/10.1016/j.physd.2022.133406 |
work_keys_str_mv | AT messengerdaniela learningmeanfieldequationsfromparticledatausingwsindy AT bortzdavidm learningmeanfieldequationsfromparticledatausingwsindy |