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Multi-class semantic segmentation of breast tissues from MRI images using U-Net based on Haar wavelet pooling

MRI images used in breast cancer diagnosis are taken in a lying position and therefore are inappropriate for reconstructing the natural breast shape in a standing position. Some studies have proposed methods to present the breast shape in a standing position using an ordinary differential equation o...

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Autores principales: Yang, Kwang Bin, Lee, Jinwon, Yang, Jeongsam
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10359288/
https://www.ncbi.nlm.nih.gov/pubmed/37474633
http://dx.doi.org/10.1038/s41598-023-38557-0
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author Yang, Kwang Bin
Lee, Jinwon
Yang, Jeongsam
author_facet Yang, Kwang Bin
Lee, Jinwon
Yang, Jeongsam
author_sort Yang, Kwang Bin
collection PubMed
description MRI images used in breast cancer diagnosis are taken in a lying position and therefore are inappropriate for reconstructing the natural breast shape in a standing position. Some studies have proposed methods to present the breast shape in a standing position using an ordinary differential equation of the finite element method. However, it is difficult to obtain meaningful results because breast tissues have different elastic moduli. This study proposed a multi-class semantic segmentation method for breast tissues to reconstruct breast shapes using U-Net based on Haar wavelet pooling. First, a dataset was constructed by labeling the skin, fat, and fibro-glandular tissues and the background from MRI images taken in a lying position. Next, multi-class semantic segmentation was performed using U-Net based on Haar wavelet pooling to improve the segmentation accuracy for breast tissues. The U-Net effectively extracted breast tissue features while reducing image information loss in a subsampling stage using multiple sub-bands. In addition, the proposed network is robust to overfitting. The proposed network showed a mIOU of 87.48 for segmenting breast tissues. The proposed networks demonstrated high-accuracy segmentation for breast tissue with different elastic moduli to reconstruct the natural breast shape.
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spelling pubmed-103592882023-07-22 Multi-class semantic segmentation of breast tissues from MRI images using U-Net based on Haar wavelet pooling Yang, Kwang Bin Lee, Jinwon Yang, Jeongsam Sci Rep Article MRI images used in breast cancer diagnosis are taken in a lying position and therefore are inappropriate for reconstructing the natural breast shape in a standing position. Some studies have proposed methods to present the breast shape in a standing position using an ordinary differential equation of the finite element method. However, it is difficult to obtain meaningful results because breast tissues have different elastic moduli. This study proposed a multi-class semantic segmentation method for breast tissues to reconstruct breast shapes using U-Net based on Haar wavelet pooling. First, a dataset was constructed by labeling the skin, fat, and fibro-glandular tissues and the background from MRI images taken in a lying position. Next, multi-class semantic segmentation was performed using U-Net based on Haar wavelet pooling to improve the segmentation accuracy for breast tissues. The U-Net effectively extracted breast tissue features while reducing image information loss in a subsampling stage using multiple sub-bands. In addition, the proposed network is robust to overfitting. The proposed network showed a mIOU of 87.48 for segmenting breast tissues. The proposed networks demonstrated high-accuracy segmentation for breast tissue with different elastic moduli to reconstruct the natural breast shape. Nature Publishing Group UK 2023-07-20 /pmc/articles/PMC10359288/ /pubmed/37474633 http://dx.doi.org/10.1038/s41598-023-38557-0 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Yang, Kwang Bin
Lee, Jinwon
Yang, Jeongsam
Multi-class semantic segmentation of breast tissues from MRI images using U-Net based on Haar wavelet pooling
title Multi-class semantic segmentation of breast tissues from MRI images using U-Net based on Haar wavelet pooling
title_full Multi-class semantic segmentation of breast tissues from MRI images using U-Net based on Haar wavelet pooling
title_fullStr Multi-class semantic segmentation of breast tissues from MRI images using U-Net based on Haar wavelet pooling
title_full_unstemmed Multi-class semantic segmentation of breast tissues from MRI images using U-Net based on Haar wavelet pooling
title_short Multi-class semantic segmentation of breast tissues from MRI images using U-Net based on Haar wavelet pooling
title_sort multi-class semantic segmentation of breast tissues from mri images using u-net based on haar wavelet pooling
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10359288/
https://www.ncbi.nlm.nih.gov/pubmed/37474633
http://dx.doi.org/10.1038/s41598-023-38557-0
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