Cargando…

Machine learning for detecting Wilson's disease by amplitude of low-frequency fluctuation

Wilson's disease (WD) is a genetic disorder with the A7P7B gene mutations. It is difficult to diagnose in clinic. The purpose of this study was to confirm whether amplitude of low-frequency fluctuations (ALFF) is one of the potential biomarkers for the diagnosis of WD. The study enrolled 30 hea...

Descripción completa

Detalles Bibliográficos
Autores principales: Zhang, Bing, Peng, Jingjing, Chen, Hong, Hu, Wenbin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10362133/
https://www.ncbi.nlm.nih.gov/pubmed/37483763
http://dx.doi.org/10.1016/j.heliyon.2023.e18087
_version_ 1785076356084662272
author Zhang, Bing
Peng, Jingjing
Chen, Hong
Hu, Wenbin
author_facet Zhang, Bing
Peng, Jingjing
Chen, Hong
Hu, Wenbin
author_sort Zhang, Bing
collection PubMed
description Wilson's disease (WD) is a genetic disorder with the A7P7B gene mutations. It is difficult to diagnose in clinic. The purpose of this study was to confirm whether amplitude of low-frequency fluctuations (ALFF) is one of the potential biomarkers for the diagnosis of WD. The study enrolled 30 healthy controls (HCs) and 37 WD patients (WDs) to obtain their resting-state functional magnetic resonance imaging (rs-fMRI) data. ALFF was obtained through preprocessing of the rs-fMRI data. To distinguish between patients with WDs and HCs, four clusters with abnormal ALFF-z values were identified through between-group comparisons. Based on these clusters, three machine learning models were developed, including Random Forest (RF), Support Vector Machine (SVM), and Logistic Regression (LR). Abnormal ALFF z-values were also combined with volume information, clinical variables, and imaging features to develop machine learning models. There were 4 clusters where the ALFF z-values of the WDs were significantly higher than that of the HCs. Cluster1 was in the cerebellar region, Cluster2 was in the left caudate nucleus, Cluster3 was in the bilateral thalamus, and Cluster4 was in the right caudate nucleus. In the training set and test set, the models trained with Cluster2, Cluster3, and Cluster4 achieved area of curve (AUC) greater than 0.80. In the Delong test, only the AUC values of models trained with Cluster4 exhibited statistical significance. The AUC values of the Logit model (P = 0.04) and RF model (P = 0.04) were significantly higher than those of the SVM model. In the test set, the LR model and RF model trained with Cluster3 had high specificity, sensitivity, and accuracy. By conducting the Delong test, we discovered that there was no statistically significant inter-group difference in AUC values between the model that integrates multi-modal information and the model before fusion. The LR models trained with multimodal information and Cluster 4, as well as the LR and RF models trained with multimodal information and Cluster 3, have demonstrated high accuracy, specificity, and sensitivity. Overall, these findings suggest that using ALFF based on the thalamus or caudate nucleus as markers can effectively differentiate between WDs and HCs. The fusion of multimodal information did not significantly improve the classification performance of the models before fusion.
format Online
Article
Text
id pubmed-10362133
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Elsevier
record_format MEDLINE/PubMed
spelling pubmed-103621332023-07-23 Machine learning for detecting Wilson's disease by amplitude of low-frequency fluctuation Zhang, Bing Peng, Jingjing Chen, Hong Hu, Wenbin Heliyon Research Article Wilson's disease (WD) is a genetic disorder with the A7P7B gene mutations. It is difficult to diagnose in clinic. The purpose of this study was to confirm whether amplitude of low-frequency fluctuations (ALFF) is one of the potential biomarkers for the diagnosis of WD. The study enrolled 30 healthy controls (HCs) and 37 WD patients (WDs) to obtain their resting-state functional magnetic resonance imaging (rs-fMRI) data. ALFF was obtained through preprocessing of the rs-fMRI data. To distinguish between patients with WDs and HCs, four clusters with abnormal ALFF-z values were identified through between-group comparisons. Based on these clusters, three machine learning models were developed, including Random Forest (RF), Support Vector Machine (SVM), and Logistic Regression (LR). Abnormal ALFF z-values were also combined with volume information, clinical variables, and imaging features to develop machine learning models. There were 4 clusters where the ALFF z-values of the WDs were significantly higher than that of the HCs. Cluster1 was in the cerebellar region, Cluster2 was in the left caudate nucleus, Cluster3 was in the bilateral thalamus, and Cluster4 was in the right caudate nucleus. In the training set and test set, the models trained with Cluster2, Cluster3, and Cluster4 achieved area of curve (AUC) greater than 0.80. In the Delong test, only the AUC values of models trained with Cluster4 exhibited statistical significance. The AUC values of the Logit model (P = 0.04) and RF model (P = 0.04) were significantly higher than those of the SVM model. In the test set, the LR model and RF model trained with Cluster3 had high specificity, sensitivity, and accuracy. By conducting the Delong test, we discovered that there was no statistically significant inter-group difference in AUC values between the model that integrates multi-modal information and the model before fusion. The LR models trained with multimodal information and Cluster 4, as well as the LR and RF models trained with multimodal information and Cluster 3, have demonstrated high accuracy, specificity, and sensitivity. Overall, these findings suggest that using ALFF based on the thalamus or caudate nucleus as markers can effectively differentiate between WDs and HCs. The fusion of multimodal information did not significantly improve the classification performance of the models before fusion. Elsevier 2023-07-07 /pmc/articles/PMC10362133/ /pubmed/37483763 http://dx.doi.org/10.1016/j.heliyon.2023.e18087 Text en © 2023 The Authors. Published by Elsevier Ltd. https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Research Article
Zhang, Bing
Peng, Jingjing
Chen, Hong
Hu, Wenbin
Machine learning for detecting Wilson's disease by amplitude of low-frequency fluctuation
title Machine learning for detecting Wilson's disease by amplitude of low-frequency fluctuation
title_full Machine learning for detecting Wilson's disease by amplitude of low-frequency fluctuation
title_fullStr Machine learning for detecting Wilson's disease by amplitude of low-frequency fluctuation
title_full_unstemmed Machine learning for detecting Wilson's disease by amplitude of low-frequency fluctuation
title_short Machine learning for detecting Wilson's disease by amplitude of low-frequency fluctuation
title_sort machine learning for detecting wilson's disease by amplitude of low-frequency fluctuation
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10362133/
https://www.ncbi.nlm.nih.gov/pubmed/37483763
http://dx.doi.org/10.1016/j.heliyon.2023.e18087
work_keys_str_mv AT zhangbing machinelearningfordetectingwilsonsdiseasebyamplitudeoflowfrequencyfluctuation
AT pengjingjing machinelearningfordetectingwilsonsdiseasebyamplitudeoflowfrequencyfluctuation
AT chenhong machinelearningfordetectingwilsonsdiseasebyamplitudeoflowfrequencyfluctuation
AT huwenbin machinelearningfordetectingwilsonsdiseasebyamplitudeoflowfrequencyfluctuation