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Enhancement of VGG16 model with multi-view and spatial dropout for classification of mosquito vectors

Mosquitoes transmit pathogens that can cause numerous significant infectious diseases in humans and animals such as malaria, dengue fever, chikungunya fever, and encephalitis. Although the VGG16 model is not one of the most advanced CNN networks, it is reported that a fine-tuned VGG16 model achieves...

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Autores principales: Pora, Wanchalerm, Kasamsumran, Natthakorn, Tharawatcharasart, Katanyu, Ampol, Rinnara, Siriyasatien, Padet, Jariyapan, Narissara
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10365266/
https://www.ncbi.nlm.nih.gov/pubmed/37486913
http://dx.doi.org/10.1371/journal.pone.0284330
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author Pora, Wanchalerm
Kasamsumran, Natthakorn
Tharawatcharasart, Katanyu
Ampol, Rinnara
Siriyasatien, Padet
Jariyapan, Narissara
author_facet Pora, Wanchalerm
Kasamsumran, Natthakorn
Tharawatcharasart, Katanyu
Ampol, Rinnara
Siriyasatien, Padet
Jariyapan, Narissara
author_sort Pora, Wanchalerm
collection PubMed
description Mosquitoes transmit pathogens that can cause numerous significant infectious diseases in humans and animals such as malaria, dengue fever, chikungunya fever, and encephalitis. Although the VGG16 model is not one of the most advanced CNN networks, it is reported that a fine-tuned VGG16 model achieves accuracy over 90% when applied to the classification of mosquitoes. The present study sets out to improve the accuracy and robustness of the VGG16 network by incorporating spatial dropout layers to regularize the network and by modifying its structure to incorporate multi-view inputs. Herein, four models are implemented: (A) early-combined, (B) middle-combined, (C) late-combined, and (D) ensemble model. Moreover, a structure for combining Models (A), (B), (C), and (D), known as the classifier, is developed. Two image datasets, including a reference dataset of mosquitoes in South Korea and a newly generated dataset of mosquitoes in Thailand, are used to evaluate our models. Regards the reference dataset, the average accuracy of ten runs improved from 83.26% to 99.77%, while the standard deviation decreased from 2.60% to 0.12%. When tested on the new dataset, the classifier’s accuracy was also over 99% with a standard deviation of less than 2%. This indicates that the algorithm achieves high accuracy with low variation and is independent of a particular dataset. To evaluate the robustness of the classifier, it was applied to a small dataset consisting of mosquito images captured under various conditions. Its accuracy dropped to 86.14%, but after retraining with the small dataset, it regained its previous level of precision. This demonstrates that the classifier is resilient to variation in the dataset and can be retrained to adapt to the variation. The classifier and the new mosquito dataset could be utilized to develop an application for efficient and rapid entomological surveillance for the prevention and control of mosquito-borne diseases.
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spelling pubmed-103652662023-07-25 Enhancement of VGG16 model with multi-view and spatial dropout for classification of mosquito vectors Pora, Wanchalerm Kasamsumran, Natthakorn Tharawatcharasart, Katanyu Ampol, Rinnara Siriyasatien, Padet Jariyapan, Narissara PLoS One Research Article Mosquitoes transmit pathogens that can cause numerous significant infectious diseases in humans and animals such as malaria, dengue fever, chikungunya fever, and encephalitis. Although the VGG16 model is not one of the most advanced CNN networks, it is reported that a fine-tuned VGG16 model achieves accuracy over 90% when applied to the classification of mosquitoes. The present study sets out to improve the accuracy and robustness of the VGG16 network by incorporating spatial dropout layers to regularize the network and by modifying its structure to incorporate multi-view inputs. Herein, four models are implemented: (A) early-combined, (B) middle-combined, (C) late-combined, and (D) ensemble model. Moreover, a structure for combining Models (A), (B), (C), and (D), known as the classifier, is developed. Two image datasets, including a reference dataset of mosquitoes in South Korea and a newly generated dataset of mosquitoes in Thailand, are used to evaluate our models. Regards the reference dataset, the average accuracy of ten runs improved from 83.26% to 99.77%, while the standard deviation decreased from 2.60% to 0.12%. When tested on the new dataset, the classifier’s accuracy was also over 99% with a standard deviation of less than 2%. This indicates that the algorithm achieves high accuracy with low variation and is independent of a particular dataset. To evaluate the robustness of the classifier, it was applied to a small dataset consisting of mosquito images captured under various conditions. Its accuracy dropped to 86.14%, but after retraining with the small dataset, it regained its previous level of precision. This demonstrates that the classifier is resilient to variation in the dataset and can be retrained to adapt to the variation. The classifier and the new mosquito dataset could be utilized to develop an application for efficient and rapid entomological surveillance for the prevention and control of mosquito-borne diseases. Public Library of Science 2023-07-24 /pmc/articles/PMC10365266/ /pubmed/37486913 http://dx.doi.org/10.1371/journal.pone.0284330 Text en © 2023 Pora et al https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Pora, Wanchalerm
Kasamsumran, Natthakorn
Tharawatcharasart, Katanyu
Ampol, Rinnara
Siriyasatien, Padet
Jariyapan, Narissara
Enhancement of VGG16 model with multi-view and spatial dropout for classification of mosquito vectors
title Enhancement of VGG16 model with multi-view and spatial dropout for classification of mosquito vectors
title_full Enhancement of VGG16 model with multi-view and spatial dropout for classification of mosquito vectors
title_fullStr Enhancement of VGG16 model with multi-view and spatial dropout for classification of mosquito vectors
title_full_unstemmed Enhancement of VGG16 model with multi-view and spatial dropout for classification of mosquito vectors
title_short Enhancement of VGG16 model with multi-view and spatial dropout for classification of mosquito vectors
title_sort enhancement of vgg16 model with multi-view and spatial dropout for classification of mosquito vectors
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10365266/
https://www.ncbi.nlm.nih.gov/pubmed/37486913
http://dx.doi.org/10.1371/journal.pone.0284330
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