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Aminoadipate reductase gene: a new fungal-specific gene for comparative evolutionary analyses
BACKGROUND: In fungi, aminoadipate reductase converts 2-aminoadipate to 2-aminoadipate 6-semialdehyde. However, other organisms have no homologue to the aminoadipate reductase gene and this pathway appears to be restricted to fungi. In this study, we designed degenerate primers for polymerase chain...
Autores principales: | , , , |
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Formato: | Texto |
Lenguaje: | English |
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BioMed Central
2002
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC103663/ https://www.ncbi.nlm.nih.gov/pubmed/11931673 http://dx.doi.org/10.1186/1471-2148-2-6 |
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author | An, Kwang-Deuk Nishida, Hiromi Miura, Yoshiharu Yokota, Akira |
author_facet | An, Kwang-Deuk Nishida, Hiromi Miura, Yoshiharu Yokota, Akira |
author_sort | An, Kwang-Deuk |
collection | PubMed |
description | BACKGROUND: In fungi, aminoadipate reductase converts 2-aminoadipate to 2-aminoadipate 6-semialdehyde. However, other organisms have no homologue to the aminoadipate reductase gene and this pathway appears to be restricted to fungi. In this study, we designed degenerate primers for polymerase chain reaction (PCR) amplification of a large fragment of the aminoadipate reductase gene for divergent fungi. RESULTS: Using these primers, we amplified DNA fragments from the archiascomycetous yeast Saitoella complicata and the black-koji mold Aspergillus awamori. Based on an alignment of the deduced amino acid sequences, we constructed phylogenetic trees. These trees are consistent with current ascomycete systematics and demonstrate the potential utility of the aminoadipete reductase gene for phylogenetic analyses of fungi. CONCLUSIONS: We believe that the comparison of aminoadipate reductase among species will be useful for molecular ecological and evolutionary studies of fungi, because this enzyme-encoding gene is a fungal-specific gene and generally appears to be single copy. |
format | Text |
id | pubmed-103663 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2002 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-1036632002-05-02 Aminoadipate reductase gene: a new fungal-specific gene for comparative evolutionary analyses An, Kwang-Deuk Nishida, Hiromi Miura, Yoshiharu Yokota, Akira BMC Evol Biol Research Article BACKGROUND: In fungi, aminoadipate reductase converts 2-aminoadipate to 2-aminoadipate 6-semialdehyde. However, other organisms have no homologue to the aminoadipate reductase gene and this pathway appears to be restricted to fungi. In this study, we designed degenerate primers for polymerase chain reaction (PCR) amplification of a large fragment of the aminoadipate reductase gene for divergent fungi. RESULTS: Using these primers, we amplified DNA fragments from the archiascomycetous yeast Saitoella complicata and the black-koji mold Aspergillus awamori. Based on an alignment of the deduced amino acid sequences, we constructed phylogenetic trees. These trees are consistent with current ascomycete systematics and demonstrate the potential utility of the aminoadipete reductase gene for phylogenetic analyses of fungi. CONCLUSIONS: We believe that the comparison of aminoadipate reductase among species will be useful for molecular ecological and evolutionary studies of fungi, because this enzyme-encoding gene is a fungal-specific gene and generally appears to be single copy. BioMed Central 2002-04-03 /pmc/articles/PMC103663/ /pubmed/11931673 http://dx.doi.org/10.1186/1471-2148-2-6 Text en Copyright © 2002 An et al; licensee BioMed Central Ltd. This is an Open Access article: verbatim copying and redistribution of this article are permitted in all media for any purpose, provided this notice is preserved along with the article's original URL. |
spellingShingle | Research Article An, Kwang-Deuk Nishida, Hiromi Miura, Yoshiharu Yokota, Akira Aminoadipate reductase gene: a new fungal-specific gene for comparative evolutionary analyses |
title | Aminoadipate reductase gene: a new fungal-specific gene for comparative evolutionary analyses |
title_full | Aminoadipate reductase gene: a new fungal-specific gene for comparative evolutionary analyses |
title_fullStr | Aminoadipate reductase gene: a new fungal-specific gene for comparative evolutionary analyses |
title_full_unstemmed | Aminoadipate reductase gene: a new fungal-specific gene for comparative evolutionary analyses |
title_short | Aminoadipate reductase gene: a new fungal-specific gene for comparative evolutionary analyses |
title_sort | aminoadipate reductase gene: a new fungal-specific gene for comparative evolutionary analyses |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC103663/ https://www.ncbi.nlm.nih.gov/pubmed/11931673 http://dx.doi.org/10.1186/1471-2148-2-6 |
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