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Characterizing short germline-specific promoters with a range of expression levels in C. elegans
A core tenet of synthetic biology is that well-characterized regulatory elements are essential for engineering biological systems. Here, we characterize the specificity and expression levels of 18 short (254 to 880 bp) candidate germline promoters using a single-copy gfp reporter assay in C. elegans...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Caltech Library
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10366684/ https://www.ncbi.nlm.nih.gov/pubmed/37497182 http://dx.doi.org/10.17912/micropub.biology.000843 |
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author | Aljohani, Mohammed D. El Mouridi, Sonia Frøkjær-Jensen, Christian |
author_facet | Aljohani, Mohammed D. El Mouridi, Sonia Frøkjær-Jensen, Christian |
author_sort | Aljohani, Mohammed D. |
collection | PubMed |
description | A core tenet of synthetic biology is that well-characterized regulatory elements are essential for engineering biological systems. Here, we characterize the specificity and expression levels of 18 short (254 to 880 bp) candidate germline promoters using a single-copy gfp reporter assay in C. elegans . Six promoters resulted in ubiquitous expression, three did not drive detectable expression, and nine were germline-specific. Several promoters drove stronger germline expression than the commonly-used mex-5 promoter. The promoters range across expression levels and facilitate, for example, low expression of toxic transgenes or high expression of gene editing enzymes, and their compactness facilitates gene synthesis. |
format | Online Article Text |
id | pubmed-10366684 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Caltech Library |
record_format | MEDLINE/PubMed |
spelling | pubmed-103666842023-07-26 Characterizing short germline-specific promoters with a range of expression levels in C. elegans Aljohani, Mohammed D. El Mouridi, Sonia Frøkjær-Jensen, Christian MicroPubl Biol Materials and Reagents A core tenet of synthetic biology is that well-characterized regulatory elements are essential for engineering biological systems. Here, we characterize the specificity and expression levels of 18 short (254 to 880 bp) candidate germline promoters using a single-copy gfp reporter assay in C. elegans . Six promoters resulted in ubiquitous expression, three did not drive detectable expression, and nine were germline-specific. Several promoters drove stronger germline expression than the commonly-used mex-5 promoter. The promoters range across expression levels and facilitate, for example, low expression of toxic transgenes or high expression of gene editing enzymes, and their compactness facilitates gene synthesis. Caltech Library 2023-07-10 /pmc/articles/PMC10366684/ /pubmed/37497182 http://dx.doi.org/10.17912/micropub.biology.000843 Text en Copyright: © 2023 by the authors https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Materials and Reagents Aljohani, Mohammed D. El Mouridi, Sonia Frøkjær-Jensen, Christian Characterizing short germline-specific promoters with a range of expression levels in C. elegans |
title |
Characterizing short germline-specific promoters with a range of expression levels in
C. elegans
|
title_full |
Characterizing short germline-specific promoters with a range of expression levels in
C. elegans
|
title_fullStr |
Characterizing short germline-specific promoters with a range of expression levels in
C. elegans
|
title_full_unstemmed |
Characterizing short germline-specific promoters with a range of expression levels in
C. elegans
|
title_short |
Characterizing short germline-specific promoters with a range of expression levels in
C. elegans
|
title_sort | characterizing short germline-specific promoters with a range of expression levels in
c. elegans |
topic | Materials and Reagents |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10366684/ https://www.ncbi.nlm.nih.gov/pubmed/37497182 http://dx.doi.org/10.17912/micropub.biology.000843 |
work_keys_str_mv | AT aljohanimohammedd characterizingshortgermlinespecificpromoterswitharangeofexpressionlevelsincelegans AT elmouridisonia characterizingshortgermlinespecificpromoterswitharangeofexpressionlevelsincelegans AT frøkjærjensenchristian characterizingshortgermlinespecificpromoterswitharangeofexpressionlevelsincelegans |