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A New and Profitable Protocol to DNA Extraction in Limnospira maxima
Limnospira maxima is a remarkable organism showing great potential as a versatile and sustainable food source, offering a powerful solution to address the pressing issues of malnutrition and undernourishment worldwide. L. maxima contains high amounts of proteins, vitamins, minerals, and essential fa...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10366785/ https://www.ncbi.nlm.nih.gov/pubmed/37489429 http://dx.doi.org/10.3390/mps6040062 |
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author | Pineda-Rodriguez, Yirlis Yadeth Pompelli, Marcelo F. Jarma-Orozco, Alfredo Rodríguez, Novisel Veitía Rodriguez-Paez, Luis Alfonso |
author_facet | Pineda-Rodriguez, Yirlis Yadeth Pompelli, Marcelo F. Jarma-Orozco, Alfredo Rodríguez, Novisel Veitía Rodriguez-Paez, Luis Alfonso |
author_sort | Pineda-Rodriguez, Yirlis Yadeth |
collection | PubMed |
description | Limnospira maxima is a remarkable organism showing great potential as a versatile and sustainable food source, offering a powerful solution to address the pressing issues of malnutrition and undernourishment worldwide. L. maxima contains high amounts of proteins, vitamins, minerals, and essential fatty acids. It can be grown in both bioreactors and open systems; however, before considering industrial production, optimization studies of the cultivation must be conducted to obtain knowledge about the ideal environmental conditions. Additionally, for the molecular typing of L. maxima strains and their industrial scaling, high-quality and large quantity DNA extraction is required. Notwithstanding, DNA extraction from L. maxima can be challenging due to the low amount of DNA in cells and the presence of difficult-to-remove substances such as polysaccharides and polyphenols. In this study, the quality and quantity of DNA extracted from two types of L. maxima samples (Limnospira maxima strain SISCA accession GenBank: OR195505.1) were evaluated using three commercially available DNA extraction kits and two types of input biological material. The results showed that Pbact-P kit had the highest quantity and quality of DNA, while CTAB-P allowed for a higher quantity and quality of RNA, making them optimal protocols for nucleic acid extraction to improve PCR, rt-PCR, and genome sequencing of L. maxima compared with other extraction methods. |
format | Online Article Text |
id | pubmed-10366785 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-103667852023-07-26 A New and Profitable Protocol to DNA Extraction in Limnospira maxima Pineda-Rodriguez, Yirlis Yadeth Pompelli, Marcelo F. Jarma-Orozco, Alfredo Rodríguez, Novisel Veitía Rodriguez-Paez, Luis Alfonso Methods Protoc Protocol Limnospira maxima is a remarkable organism showing great potential as a versatile and sustainable food source, offering a powerful solution to address the pressing issues of malnutrition and undernourishment worldwide. L. maxima contains high amounts of proteins, vitamins, minerals, and essential fatty acids. It can be grown in both bioreactors and open systems; however, before considering industrial production, optimization studies of the cultivation must be conducted to obtain knowledge about the ideal environmental conditions. Additionally, for the molecular typing of L. maxima strains and their industrial scaling, high-quality and large quantity DNA extraction is required. Notwithstanding, DNA extraction from L. maxima can be challenging due to the low amount of DNA in cells and the presence of difficult-to-remove substances such as polysaccharides and polyphenols. In this study, the quality and quantity of DNA extracted from two types of L. maxima samples (Limnospira maxima strain SISCA accession GenBank: OR195505.1) were evaluated using three commercially available DNA extraction kits and two types of input biological material. The results showed that Pbact-P kit had the highest quantity and quality of DNA, while CTAB-P allowed for a higher quantity and quality of RNA, making them optimal protocols for nucleic acid extraction to improve PCR, rt-PCR, and genome sequencing of L. maxima compared with other extraction methods. MDPI 2023-07-01 /pmc/articles/PMC10366785/ /pubmed/37489429 http://dx.doi.org/10.3390/mps6040062 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Protocol Pineda-Rodriguez, Yirlis Yadeth Pompelli, Marcelo F. Jarma-Orozco, Alfredo Rodríguez, Novisel Veitía Rodriguez-Paez, Luis Alfonso A New and Profitable Protocol to DNA Extraction in Limnospira maxima |
title | A New and Profitable Protocol to DNA Extraction in Limnospira maxima |
title_full | A New and Profitable Protocol to DNA Extraction in Limnospira maxima |
title_fullStr | A New and Profitable Protocol to DNA Extraction in Limnospira maxima |
title_full_unstemmed | A New and Profitable Protocol to DNA Extraction in Limnospira maxima |
title_short | A New and Profitable Protocol to DNA Extraction in Limnospira maxima |
title_sort | new and profitable protocol to dna extraction in limnospira maxima |
topic | Protocol |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10366785/ https://www.ncbi.nlm.nih.gov/pubmed/37489429 http://dx.doi.org/10.3390/mps6040062 |
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