Cargando…

Impact of Tomosynthesis Acquisition on 3D Segmentations of Breast Outline and Adipose/Dense Tissue with AI: A Simulation-Based Study

Digital breast tomosynthesis (DBT) reconstructions introduce out-of-plane artifacts and false-tissue boundaries impacting the dense/adipose and breast outline (convex hull) segmentations. A virtual clinical trial method was proposed to segment both the breast tissues and the breast outline in DBT re...

Descripción completa

Detalles Bibliográficos
Autores principales: Barufaldi, Bruno, Gomes, Jordy, do Rego, Thais G., Malheiros, Yuri, Filho, Telmo M. Silva, Borges, Lucas R., Acciavatti, Raymond J., Surti, Suleman, Maidment, Andrew D. A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10366831/
https://www.ncbi.nlm.nih.gov/pubmed/37489471
http://dx.doi.org/10.3390/tomography9040103
_version_ 1785077256463319040
author Barufaldi, Bruno
Gomes, Jordy
do Rego, Thais G.
Malheiros, Yuri
Filho, Telmo M. Silva
Borges, Lucas R.
Acciavatti, Raymond J.
Surti, Suleman
Maidment, Andrew D. A.
author_facet Barufaldi, Bruno
Gomes, Jordy
do Rego, Thais G.
Malheiros, Yuri
Filho, Telmo M. Silva
Borges, Lucas R.
Acciavatti, Raymond J.
Surti, Suleman
Maidment, Andrew D. A.
author_sort Barufaldi, Bruno
collection PubMed
description Digital breast tomosynthesis (DBT) reconstructions introduce out-of-plane artifacts and false-tissue boundaries impacting the dense/adipose and breast outline (convex hull) segmentations. A virtual clinical trial method was proposed to segment both the breast tissues and the breast outline in DBT reconstructions. The DBT images of a representative population were simulated using three acquisition geometries: a left–right scan (conventional, I), a two-directional scan in the shape of a “T” (II), and an extra-wide range (XWR, III) left–right scan at a six-times higher dose than I. The nnU-Net was modified including two losses for segmentation: (1) tissues and (2) breast outline. The impact of loss (1) and the combination of loss (1) and (2) was evaluated using models trained with data simulating geometry I. The impact of the geometry was evaluated using the combined loss (1&2). The loss (1&2) improved the convex hull estimates, resolving 22.2% of the false classification of air voxels. Geometry II was superior to I and III, resolving 99.1% and 96.8% of the false classification of air voxels. Geometry III (Dice = (0.98, 0.94)) was superior to I (0.92, 0.78) and II (0.93, 0.74) for the tissue segmentation (adipose, dense, respectively). Thus, the loss (1&2) provided better segmentation, and geometries T and XWR improved the dense/adipose and breast outline segmentations relative to the conventional scan.
format Online
Article
Text
id pubmed-10366831
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-103668312023-07-26 Impact of Tomosynthesis Acquisition on 3D Segmentations of Breast Outline and Adipose/Dense Tissue with AI: A Simulation-Based Study Barufaldi, Bruno Gomes, Jordy do Rego, Thais G. Malheiros, Yuri Filho, Telmo M. Silva Borges, Lucas R. Acciavatti, Raymond J. Surti, Suleman Maidment, Andrew D. A. Tomography Article Digital breast tomosynthesis (DBT) reconstructions introduce out-of-plane artifacts and false-tissue boundaries impacting the dense/adipose and breast outline (convex hull) segmentations. A virtual clinical trial method was proposed to segment both the breast tissues and the breast outline in DBT reconstructions. The DBT images of a representative population were simulated using three acquisition geometries: a left–right scan (conventional, I), a two-directional scan in the shape of a “T” (II), and an extra-wide range (XWR, III) left–right scan at a six-times higher dose than I. The nnU-Net was modified including two losses for segmentation: (1) tissues and (2) breast outline. The impact of loss (1) and the combination of loss (1) and (2) was evaluated using models trained with data simulating geometry I. The impact of the geometry was evaluated using the combined loss (1&2). The loss (1&2) improved the convex hull estimates, resolving 22.2% of the false classification of air voxels. Geometry II was superior to I and III, resolving 99.1% and 96.8% of the false classification of air voxels. Geometry III (Dice = (0.98, 0.94)) was superior to I (0.92, 0.78) and II (0.93, 0.74) for the tissue segmentation (adipose, dense, respectively). Thus, the loss (1&2) provided better segmentation, and geometries T and XWR improved the dense/adipose and breast outline segmentations relative to the conventional scan. MDPI 2023-07-03 /pmc/articles/PMC10366831/ /pubmed/37489471 http://dx.doi.org/10.3390/tomography9040103 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Barufaldi, Bruno
Gomes, Jordy
do Rego, Thais G.
Malheiros, Yuri
Filho, Telmo M. Silva
Borges, Lucas R.
Acciavatti, Raymond J.
Surti, Suleman
Maidment, Andrew D. A.
Impact of Tomosynthesis Acquisition on 3D Segmentations of Breast Outline and Adipose/Dense Tissue with AI: A Simulation-Based Study
title Impact of Tomosynthesis Acquisition on 3D Segmentations of Breast Outline and Adipose/Dense Tissue with AI: A Simulation-Based Study
title_full Impact of Tomosynthesis Acquisition on 3D Segmentations of Breast Outline and Adipose/Dense Tissue with AI: A Simulation-Based Study
title_fullStr Impact of Tomosynthesis Acquisition on 3D Segmentations of Breast Outline and Adipose/Dense Tissue with AI: A Simulation-Based Study
title_full_unstemmed Impact of Tomosynthesis Acquisition on 3D Segmentations of Breast Outline and Adipose/Dense Tissue with AI: A Simulation-Based Study
title_short Impact of Tomosynthesis Acquisition on 3D Segmentations of Breast Outline and Adipose/Dense Tissue with AI: A Simulation-Based Study
title_sort impact of tomosynthesis acquisition on 3d segmentations of breast outline and adipose/dense tissue with ai: a simulation-based study
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10366831/
https://www.ncbi.nlm.nih.gov/pubmed/37489471
http://dx.doi.org/10.3390/tomography9040103
work_keys_str_mv AT barufaldibruno impactoftomosynthesisacquisitionon3dsegmentationsofbreastoutlineandadiposedensetissuewithaiasimulationbasedstudy
AT gomesjordy impactoftomosynthesisacquisitionon3dsegmentationsofbreastoutlineandadiposedensetissuewithaiasimulationbasedstudy
AT doregothaisg impactoftomosynthesisacquisitionon3dsegmentationsofbreastoutlineandadiposedensetissuewithaiasimulationbasedstudy
AT malheirosyuri impactoftomosynthesisacquisitionon3dsegmentationsofbreastoutlineandadiposedensetissuewithaiasimulationbasedstudy
AT filhotelmomsilva impactoftomosynthesisacquisitionon3dsegmentationsofbreastoutlineandadiposedensetissuewithaiasimulationbasedstudy
AT borgeslucasr impactoftomosynthesisacquisitionon3dsegmentationsofbreastoutlineandadiposedensetissuewithaiasimulationbasedstudy
AT acciavattiraymondj impactoftomosynthesisacquisitionon3dsegmentationsofbreastoutlineandadiposedensetissuewithaiasimulationbasedstudy
AT surtisuleman impactoftomosynthesisacquisitionon3dsegmentationsofbreastoutlineandadiposedensetissuewithaiasimulationbasedstudy
AT maidmentandrewda impactoftomosynthesisacquisitionon3dsegmentationsofbreastoutlineandadiposedensetissuewithaiasimulationbasedstudy