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Spatiotemporal visual statistics of aquatic environments in the natural habitats of zebrafish

Animal sensory systems are tightly adapted to the demands of their environment. In the visual domain, research has shown that many species have circuits and systems that exploit statistical regularities in natural visual signals. The zebrafish is a popular model animal in visual neuroscience, but re...

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Autores principales: Cai, Lanya T., Krishna, Venkatesh S., Hladnik, Tim C., Guilbeault, Nicholas C., Vijayakumar, Chinnian, Arunachalam, Muthukumarasamy, Juntti, Scott A., Arrenberg, Aristides B., Thiele, Tod R., Cooper, Emily A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10368656/
https://www.ncbi.nlm.nih.gov/pubmed/37491571
http://dx.doi.org/10.1038/s41598-023-36099-z
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author Cai, Lanya T.
Krishna, Venkatesh S.
Hladnik, Tim C.
Guilbeault, Nicholas C.
Vijayakumar, Chinnian
Arunachalam, Muthukumarasamy
Juntti, Scott A.
Arrenberg, Aristides B.
Thiele, Tod R.
Cooper, Emily A.
author_facet Cai, Lanya T.
Krishna, Venkatesh S.
Hladnik, Tim C.
Guilbeault, Nicholas C.
Vijayakumar, Chinnian
Arunachalam, Muthukumarasamy
Juntti, Scott A.
Arrenberg, Aristides B.
Thiele, Tod R.
Cooper, Emily A.
author_sort Cai, Lanya T.
collection PubMed
description Animal sensory systems are tightly adapted to the demands of their environment. In the visual domain, research has shown that many species have circuits and systems that exploit statistical regularities in natural visual signals. The zebrafish is a popular model animal in visual neuroscience, but relatively little quantitative data is available about the visual properties of the aquatic habitats where zebrafish reside, as compared to terrestrial environments. Improving our understanding of the visual demands of the aquatic habitats of zebrafish can enhance the insights about sensory neuroscience yielded by this model system. We analyzed a video dataset of zebrafish habitats captured by a stationary camera and compared this dataset to videos of terrestrial scenes in the same geographic area. Our analysis of the spatiotemporal structure in these videos suggests that zebrafish habitats are characterized by low visual contrast and strong motion when compared to terrestrial environments. Similar to terrestrial environments, zebrafish habitats tended to be dominated by dark contrasts, particularly in the lower visual field. We discuss how these properties of the visual environment can inform the study of zebrafish visual behavior and neural processing and, by extension, can inform our understanding of the vertebrate brain.
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spelling pubmed-103686562023-07-27 Spatiotemporal visual statistics of aquatic environments in the natural habitats of zebrafish Cai, Lanya T. Krishna, Venkatesh S. Hladnik, Tim C. Guilbeault, Nicholas C. Vijayakumar, Chinnian Arunachalam, Muthukumarasamy Juntti, Scott A. Arrenberg, Aristides B. Thiele, Tod R. Cooper, Emily A. Sci Rep Article Animal sensory systems are tightly adapted to the demands of their environment. In the visual domain, research has shown that many species have circuits and systems that exploit statistical regularities in natural visual signals. The zebrafish is a popular model animal in visual neuroscience, but relatively little quantitative data is available about the visual properties of the aquatic habitats where zebrafish reside, as compared to terrestrial environments. Improving our understanding of the visual demands of the aquatic habitats of zebrafish can enhance the insights about sensory neuroscience yielded by this model system. We analyzed a video dataset of zebrafish habitats captured by a stationary camera and compared this dataset to videos of terrestrial scenes in the same geographic area. Our analysis of the spatiotemporal structure in these videos suggests that zebrafish habitats are characterized by low visual contrast and strong motion when compared to terrestrial environments. Similar to terrestrial environments, zebrafish habitats tended to be dominated by dark contrasts, particularly in the lower visual field. We discuss how these properties of the visual environment can inform the study of zebrafish visual behavior and neural processing and, by extension, can inform our understanding of the vertebrate brain. Nature Publishing Group UK 2023-07-25 /pmc/articles/PMC10368656/ /pubmed/37491571 http://dx.doi.org/10.1038/s41598-023-36099-z Text en © Crown 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Cai, Lanya T.
Krishna, Venkatesh S.
Hladnik, Tim C.
Guilbeault, Nicholas C.
Vijayakumar, Chinnian
Arunachalam, Muthukumarasamy
Juntti, Scott A.
Arrenberg, Aristides B.
Thiele, Tod R.
Cooper, Emily A.
Spatiotemporal visual statistics of aquatic environments in the natural habitats of zebrafish
title Spatiotemporal visual statistics of aquatic environments in the natural habitats of zebrafish
title_full Spatiotemporal visual statistics of aquatic environments in the natural habitats of zebrafish
title_fullStr Spatiotemporal visual statistics of aquatic environments in the natural habitats of zebrafish
title_full_unstemmed Spatiotemporal visual statistics of aquatic environments in the natural habitats of zebrafish
title_short Spatiotemporal visual statistics of aquatic environments in the natural habitats of zebrafish
title_sort spatiotemporal visual statistics of aquatic environments in the natural habitats of zebrafish
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10368656/
https://www.ncbi.nlm.nih.gov/pubmed/37491571
http://dx.doi.org/10.1038/s41598-023-36099-z
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