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Improved approaches to channel capacity estimation discover compromised GPCR signaling in diverse cancer cells

Intracellular signaling orchestrates an organism’s development and functioning and underlies various pathologies, such as cancer, when aberrant. A universal cell signaling characteristic is channel capacity — the measure of how much information a given transmitting system can reliably transduce. Her...

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Detalles Bibliográficos
Autores principales: Koval, Alexey, Zhang, Xin, Katanaev, Vladimir L.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10368911/
https://www.ncbi.nlm.nih.gov/pubmed/37502258
http://dx.doi.org/10.1016/j.isci.2023.107270
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author Koval, Alexey
Zhang, Xin
Katanaev, Vladimir L.
author_facet Koval, Alexey
Zhang, Xin
Katanaev, Vladimir L.
author_sort Koval, Alexey
collection PubMed
description Intracellular signaling orchestrates an organism’s development and functioning and underlies various pathologies, such as cancer, when aberrant. A universal cell signaling characteristic is channel capacity — the measure of how much information a given transmitting system can reliably transduce. Here, we describe improved approaches to quantify GPCR signaling channel capacity in single cells, averaged across cell population. We assess the channel capacity based on distribution of residuals by the cellular response amplitude. We further develop means to handle irregularly responding cancer cells using the integral values of their response to different agonist concentrations. These approaches enabled us to analyze, for the first time, channel capacity in single cancer cells. A universal feature emerging for different cancer cell types is a decreased channel capacity of their GPCR signaling. These findings provide experimental validation to the hypothesis that cancer is an information disease, bearing importance for basic cancer biology and anticancer drug discovery.
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spelling pubmed-103689112023-07-27 Improved approaches to channel capacity estimation discover compromised GPCR signaling in diverse cancer cells Koval, Alexey Zhang, Xin Katanaev, Vladimir L. iScience Article Intracellular signaling orchestrates an organism’s development and functioning and underlies various pathologies, such as cancer, when aberrant. A universal cell signaling characteristic is channel capacity — the measure of how much information a given transmitting system can reliably transduce. Here, we describe improved approaches to quantify GPCR signaling channel capacity in single cells, averaged across cell population. We assess the channel capacity based on distribution of residuals by the cellular response amplitude. We further develop means to handle irregularly responding cancer cells using the integral values of their response to different agonist concentrations. These approaches enabled us to analyze, for the first time, channel capacity in single cancer cells. A universal feature emerging for different cancer cell types is a decreased channel capacity of their GPCR signaling. These findings provide experimental validation to the hypothesis that cancer is an information disease, bearing importance for basic cancer biology and anticancer drug discovery. Elsevier 2023-07-03 /pmc/articles/PMC10368911/ /pubmed/37502258 http://dx.doi.org/10.1016/j.isci.2023.107270 Text en © 2023 The Author(s) https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Article
Koval, Alexey
Zhang, Xin
Katanaev, Vladimir L.
Improved approaches to channel capacity estimation discover compromised GPCR signaling in diverse cancer cells
title Improved approaches to channel capacity estimation discover compromised GPCR signaling in diverse cancer cells
title_full Improved approaches to channel capacity estimation discover compromised GPCR signaling in diverse cancer cells
title_fullStr Improved approaches to channel capacity estimation discover compromised GPCR signaling in diverse cancer cells
title_full_unstemmed Improved approaches to channel capacity estimation discover compromised GPCR signaling in diverse cancer cells
title_short Improved approaches to channel capacity estimation discover compromised GPCR signaling in diverse cancer cells
title_sort improved approaches to channel capacity estimation discover compromised gpcr signaling in diverse cancer cells
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10368911/
https://www.ncbi.nlm.nih.gov/pubmed/37502258
http://dx.doi.org/10.1016/j.isci.2023.107270
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