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COVID-19 transmission dynamics and the impact of vaccination: modelling, analysis and simulations

Despite the lifting of COVID-19 restrictions, the COVID-19 pandemic and its effects remain a global challenge including the sub-Saharan Africa (SSA) region. Knowledge of the COVID-19 dynamics and its potential trends amidst variations in COVID-19 vaccine coverage is therefore crucial for policy make...

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Autores principales: Malinzi, Joseph, Juma, Victor Ogesa, Madubueze, Chinwendu Emilian, Mwaonanji, John, Nkem, Godwin Nwachukwu, Mwakilama, Elias, Mupedza, Tinashe Victor, Chiteri, Vincent Nandwa, Bakare, Emmanuel Afolabi, Moyo, Isabel Linda-Zulu, Campillo-Funollet, Eduard, Nyabadza, Farai, Madzvamuse, Anotida
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Royal Society 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10369038/
https://www.ncbi.nlm.nih.gov/pubmed/37501660
http://dx.doi.org/10.1098/rsos.221656
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author Malinzi, Joseph
Juma, Victor Ogesa
Madubueze, Chinwendu Emilian
Mwaonanji, John
Nkem, Godwin Nwachukwu
Mwakilama, Elias
Mupedza, Tinashe Victor
Chiteri, Vincent Nandwa
Bakare, Emmanuel Afolabi
Moyo, Isabel Linda-Zulu
Campillo-Funollet, Eduard
Nyabadza, Farai
Madzvamuse, Anotida
author_facet Malinzi, Joseph
Juma, Victor Ogesa
Madubueze, Chinwendu Emilian
Mwaonanji, John
Nkem, Godwin Nwachukwu
Mwakilama, Elias
Mupedza, Tinashe Victor
Chiteri, Vincent Nandwa
Bakare, Emmanuel Afolabi
Moyo, Isabel Linda-Zulu
Campillo-Funollet, Eduard
Nyabadza, Farai
Madzvamuse, Anotida
author_sort Malinzi, Joseph
collection PubMed
description Despite the lifting of COVID-19 restrictions, the COVID-19 pandemic and its effects remain a global challenge including the sub-Saharan Africa (SSA) region. Knowledge of the COVID-19 dynamics and its potential trends amidst variations in COVID-19 vaccine coverage is therefore crucial for policy makers in the SSA region where vaccine uptake is generally lower than in high-income countries. Using a compartmental epidemiological model, this study aims to forecast the potential COVID-19 trends and determine how long a wave could be, taking into consideration the current vaccination rates. The model is calibrated using South African reported data for the first four waves of COVID-19, and the data for the fifth wave are used to test the validity of the model forecast. The model is qualitatively analysed by determining equilibria and their stability, calculating the basic reproduction number [Formula: see text] and investigating the local and global sensitivity analysis with respect to [Formula: see text]. The impact of vaccination and control interventions are investigated via a series of numerical simulations. Based on the fitted data and simulations, we observed that massive vaccination would only be beneficial (deaths averting) if a highly effective vaccine is used, particularly in combination with non-pharmaceutical interventions. Furthermore, our forecasts demonstrate that increased vaccination coverage in SSA increases population immunity leading to low daily infection numbers in potential future waves. Our findings could be helpful in guiding policy makers and governments in designing vaccination strategies and the implementation of other COVID-19 mitigation strategies.
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spelling pubmed-103690382023-07-27 COVID-19 transmission dynamics and the impact of vaccination: modelling, analysis and simulations Malinzi, Joseph Juma, Victor Ogesa Madubueze, Chinwendu Emilian Mwaonanji, John Nkem, Godwin Nwachukwu Mwakilama, Elias Mupedza, Tinashe Victor Chiteri, Vincent Nandwa Bakare, Emmanuel Afolabi Moyo, Isabel Linda-Zulu Campillo-Funollet, Eduard Nyabadza, Farai Madzvamuse, Anotida R Soc Open Sci Mathematics Despite the lifting of COVID-19 restrictions, the COVID-19 pandemic and its effects remain a global challenge including the sub-Saharan Africa (SSA) region. Knowledge of the COVID-19 dynamics and its potential trends amidst variations in COVID-19 vaccine coverage is therefore crucial for policy makers in the SSA region where vaccine uptake is generally lower than in high-income countries. Using a compartmental epidemiological model, this study aims to forecast the potential COVID-19 trends and determine how long a wave could be, taking into consideration the current vaccination rates. The model is calibrated using South African reported data for the first four waves of COVID-19, and the data for the fifth wave are used to test the validity of the model forecast. The model is qualitatively analysed by determining equilibria and their stability, calculating the basic reproduction number [Formula: see text] and investigating the local and global sensitivity analysis with respect to [Formula: see text]. The impact of vaccination and control interventions are investigated via a series of numerical simulations. Based on the fitted data and simulations, we observed that massive vaccination would only be beneficial (deaths averting) if a highly effective vaccine is used, particularly in combination with non-pharmaceutical interventions. Furthermore, our forecasts demonstrate that increased vaccination coverage in SSA increases population immunity leading to low daily infection numbers in potential future waves. Our findings could be helpful in guiding policy makers and governments in designing vaccination strategies and the implementation of other COVID-19 mitigation strategies. The Royal Society 2023-07-26 /pmc/articles/PMC10369038/ /pubmed/37501660 http://dx.doi.org/10.1098/rsos.221656 Text en © 2023 The Authors. https://creativecommons.org/licenses/by/4.0/Published by the Royal Society under the terms of the Creative Commons Attribution License http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, provided the original author and source are credited.
spellingShingle Mathematics
Malinzi, Joseph
Juma, Victor Ogesa
Madubueze, Chinwendu Emilian
Mwaonanji, John
Nkem, Godwin Nwachukwu
Mwakilama, Elias
Mupedza, Tinashe Victor
Chiteri, Vincent Nandwa
Bakare, Emmanuel Afolabi
Moyo, Isabel Linda-Zulu
Campillo-Funollet, Eduard
Nyabadza, Farai
Madzvamuse, Anotida
COVID-19 transmission dynamics and the impact of vaccination: modelling, analysis and simulations
title COVID-19 transmission dynamics and the impact of vaccination: modelling, analysis and simulations
title_full COVID-19 transmission dynamics and the impact of vaccination: modelling, analysis and simulations
title_fullStr COVID-19 transmission dynamics and the impact of vaccination: modelling, analysis and simulations
title_full_unstemmed COVID-19 transmission dynamics and the impact of vaccination: modelling, analysis and simulations
title_short COVID-19 transmission dynamics and the impact of vaccination: modelling, analysis and simulations
title_sort covid-19 transmission dynamics and the impact of vaccination: modelling, analysis and simulations
topic Mathematics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10369038/
https://www.ncbi.nlm.nih.gov/pubmed/37501660
http://dx.doi.org/10.1098/rsos.221656
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