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Complete chloroplast genome data of Ranunculus membranaceus (Ranunculaceae), an important medicinal plant species

The perennial alpine herb Ranunculus membranaceus (Ranunculaceae) has significant medicinal value. The complete chloroplast genome of R. membranaceus was sequenced by high-throughput Illumina sequencing Platform Illumina NovaSeq 6000. The circular genome is 156,028 bp in size, including two inverted...

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Autores principales: Ren, Yanmei, Wang, Mengyan, Wang, Zuoyi, Wu, Lin, Wan, Ji-Zhong, Zhou, Huakun, Ma, Zhen, Zhang, Chunhui
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10369386/
https://www.ncbi.nlm.nih.gov/pubmed/37501731
http://dx.doi.org/10.1016/j.dib.2023.109416
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author Ren, Yanmei
Wang, Mengyan
Wang, Zuoyi
Wu, Lin
Wan, Ji-Zhong
Zhou, Huakun
Ma, Zhen
Zhang, Chunhui
author_facet Ren, Yanmei
Wang, Mengyan
Wang, Zuoyi
Wu, Lin
Wan, Ji-Zhong
Zhou, Huakun
Ma, Zhen
Zhang, Chunhui
author_sort Ren, Yanmei
collection PubMed
description The perennial alpine herb Ranunculus membranaceus (Ranunculaceae) has significant medicinal value. The complete chloroplast genome of R. membranaceus was sequenced by high-throughput Illumina sequencing Platform Illumina NovaSeq 6000. The circular genome is 156,028 bp in size, including two inverted repeats (IRs) of 25,361 bp, a large single-copy (LSC) region of 85,491 bp, and a small single-copy (SSC) region of 19,815 bp. A total of 128 genes were annotated, namely 84 protein-coding genes (PCGs), 36 tRNA genes, and eight rRNA genes. Two phylogenetic trees of 18 species of the tribe Ranunculeae species were constructed with Meconopsis punicea as the outgroup based on the whole chloroplast genomes and the concatenated sequence of PCGs, respectively. Phylogeny showed that R. membranaceus was closely related to R. yunnanensis. These data enrich knowledge of Ranunculaceae genetics and will contribute to further studies of R. membranaceus in molecular breeding, genetic transformation, species identification, genetic engineering and phylogenetic research.
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spelling pubmed-103693862023-07-27 Complete chloroplast genome data of Ranunculus membranaceus (Ranunculaceae), an important medicinal plant species Ren, Yanmei Wang, Mengyan Wang, Zuoyi Wu, Lin Wan, Ji-Zhong Zhou, Huakun Ma, Zhen Zhang, Chunhui Data Brief Data Article The perennial alpine herb Ranunculus membranaceus (Ranunculaceae) has significant medicinal value. The complete chloroplast genome of R. membranaceus was sequenced by high-throughput Illumina sequencing Platform Illumina NovaSeq 6000. The circular genome is 156,028 bp in size, including two inverted repeats (IRs) of 25,361 bp, a large single-copy (LSC) region of 85,491 bp, and a small single-copy (SSC) region of 19,815 bp. A total of 128 genes were annotated, namely 84 protein-coding genes (PCGs), 36 tRNA genes, and eight rRNA genes. Two phylogenetic trees of 18 species of the tribe Ranunculeae species were constructed with Meconopsis punicea as the outgroup based on the whole chloroplast genomes and the concatenated sequence of PCGs, respectively. Phylogeny showed that R. membranaceus was closely related to R. yunnanensis. These data enrich knowledge of Ranunculaceae genetics and will contribute to further studies of R. membranaceus in molecular breeding, genetic transformation, species identification, genetic engineering and phylogenetic research. Elsevier 2023-07-16 /pmc/articles/PMC10369386/ /pubmed/37501731 http://dx.doi.org/10.1016/j.dib.2023.109416 Text en © 2023 The Author(s) https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Data Article
Ren, Yanmei
Wang, Mengyan
Wang, Zuoyi
Wu, Lin
Wan, Ji-Zhong
Zhou, Huakun
Ma, Zhen
Zhang, Chunhui
Complete chloroplast genome data of Ranunculus membranaceus (Ranunculaceae), an important medicinal plant species
title Complete chloroplast genome data of Ranunculus membranaceus (Ranunculaceae), an important medicinal plant species
title_full Complete chloroplast genome data of Ranunculus membranaceus (Ranunculaceae), an important medicinal plant species
title_fullStr Complete chloroplast genome data of Ranunculus membranaceus (Ranunculaceae), an important medicinal plant species
title_full_unstemmed Complete chloroplast genome data of Ranunculus membranaceus (Ranunculaceae), an important medicinal plant species
title_short Complete chloroplast genome data of Ranunculus membranaceus (Ranunculaceae), an important medicinal plant species
title_sort complete chloroplast genome data of ranunculus membranaceus (ranunculaceae), an important medicinal plant species
topic Data Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10369386/
https://www.ncbi.nlm.nih.gov/pubmed/37501731
http://dx.doi.org/10.1016/j.dib.2023.109416
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