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Utilizing Longitudinal Chest X-Rays and Reports to Pre-Fill Radiology Reports*

Despite the reduction in turn-around times in radiology reporting with the use of speech recognition software, persistent communication errors can significantly impact the interpretation of radiology reports. Pre-filling a radiology report holds promise in mitigating reporting errors, and despite mu...

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Autores principales: Zhu, Qingqing, Mathai, Tejas Sudharshan, Mukherjee, Pritam, Peng, Yifan, Summers, Ronald M., Lu, Zhiyong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Cornell University 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10370215/
https://www.ncbi.nlm.nih.gov/pubmed/37502627
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author Zhu, Qingqing
Mathai, Tejas Sudharshan
Mukherjee, Pritam
Peng, Yifan
Summers, Ronald M.
Lu, Zhiyong
author_facet Zhu, Qingqing
Mathai, Tejas Sudharshan
Mukherjee, Pritam
Peng, Yifan
Summers, Ronald M.
Lu, Zhiyong
author_sort Zhu, Qingqing
collection PubMed
description Despite the reduction in turn-around times in radiology reporting with the use of speech recognition software, persistent communication errors can significantly impact the interpretation of radiology reports. Pre-filling a radiology report holds promise in mitigating reporting errors, and despite multiple efforts in literature to generate comprehensive medical reports, there lacks approaches that exploit the longitudinal nature of patient visit records in the MIMIC-CXR dataset. To address this gap, we propose to use longitudinal multi-modal data, i.e., previous patient visit CXR, current visit CXR, and the previous visit report, to pre-fill the “findings” section of the patient’s current visit. We first gathered the longitudinal visit information for 26,625 patients from the MIMIC-CXR dataset, and created a new dataset called Longitudinal-MIMIC. With this new dataset, a transformer-based model was trained to capture the multi-modal longitudinal information from patient visit records (CXR images + reports) via a cross-attention-based multi-modal fusion module and a hierarchical memory-driven decoder. In contrast to previous works that only uses current visit data as input to train a model, our work exploits the longitudinal information available to pre-fill the “findings” section of radiology reports. Experiments show that our approach outperforms several recent approaches. Code will be published at https://github.com/CelestialShine/Longitudinal-Chest-X-Ray
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spelling pubmed-103702152023-07-27 Utilizing Longitudinal Chest X-Rays and Reports to Pre-Fill Radiology Reports* Zhu, Qingqing Mathai, Tejas Sudharshan Mukherjee, Pritam Peng, Yifan Summers, Ronald M. Lu, Zhiyong ArXiv Article Despite the reduction in turn-around times in radiology reporting with the use of speech recognition software, persistent communication errors can significantly impact the interpretation of radiology reports. Pre-filling a radiology report holds promise in mitigating reporting errors, and despite multiple efforts in literature to generate comprehensive medical reports, there lacks approaches that exploit the longitudinal nature of patient visit records in the MIMIC-CXR dataset. To address this gap, we propose to use longitudinal multi-modal data, i.e., previous patient visit CXR, current visit CXR, and the previous visit report, to pre-fill the “findings” section of the patient’s current visit. We first gathered the longitudinal visit information for 26,625 patients from the MIMIC-CXR dataset, and created a new dataset called Longitudinal-MIMIC. With this new dataset, a transformer-based model was trained to capture the multi-modal longitudinal information from patient visit records (CXR images + reports) via a cross-attention-based multi-modal fusion module and a hierarchical memory-driven decoder. In contrast to previous works that only uses current visit data as input to train a model, our work exploits the longitudinal information available to pre-fill the “findings” section of radiology reports. Experiments show that our approach outperforms several recent approaches. Code will be published at https://github.com/CelestialShine/Longitudinal-Chest-X-Ray Cornell University 2023-10-10 /pmc/articles/PMC10370215/ /pubmed/37502627 Text en https://creativecommons.org/licenses/by/4.0/This work is licensed under a Creative Commons Attribution 4.0 International License (https://creativecommons.org/licenses/by/4.0/) , which allows reusers to distribute, remix, adapt, and build upon the material in any medium or format, so long as attribution is given to the creator. The license allows for commercial use.
spellingShingle Article
Zhu, Qingqing
Mathai, Tejas Sudharshan
Mukherjee, Pritam
Peng, Yifan
Summers, Ronald M.
Lu, Zhiyong
Utilizing Longitudinal Chest X-Rays and Reports to Pre-Fill Radiology Reports*
title Utilizing Longitudinal Chest X-Rays and Reports to Pre-Fill Radiology Reports*
title_full Utilizing Longitudinal Chest X-Rays and Reports to Pre-Fill Radiology Reports*
title_fullStr Utilizing Longitudinal Chest X-Rays and Reports to Pre-Fill Radiology Reports*
title_full_unstemmed Utilizing Longitudinal Chest X-Rays and Reports to Pre-Fill Radiology Reports*
title_short Utilizing Longitudinal Chest X-Rays and Reports to Pre-Fill Radiology Reports*
title_sort utilizing longitudinal chest x-rays and reports to pre-fill radiology reports*
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10370215/
https://www.ncbi.nlm.nih.gov/pubmed/37502627
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