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Utilizing Longitudinal Chest X-Rays and Reports to Pre-Fill Radiology Reports*
Despite the reduction in turn-around times in radiology reporting with the use of speech recognition software, persistent communication errors can significantly impact the interpretation of radiology reports. Pre-filling a radiology report holds promise in mitigating reporting errors, and despite mu...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Cornell University
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10370215/ https://www.ncbi.nlm.nih.gov/pubmed/37502627 |
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author | Zhu, Qingqing Mathai, Tejas Sudharshan Mukherjee, Pritam Peng, Yifan Summers, Ronald M. Lu, Zhiyong |
author_facet | Zhu, Qingqing Mathai, Tejas Sudharshan Mukherjee, Pritam Peng, Yifan Summers, Ronald M. Lu, Zhiyong |
author_sort | Zhu, Qingqing |
collection | PubMed |
description | Despite the reduction in turn-around times in radiology reporting with the use of speech recognition software, persistent communication errors can significantly impact the interpretation of radiology reports. Pre-filling a radiology report holds promise in mitigating reporting errors, and despite multiple efforts in literature to generate comprehensive medical reports, there lacks approaches that exploit the longitudinal nature of patient visit records in the MIMIC-CXR dataset. To address this gap, we propose to use longitudinal multi-modal data, i.e., previous patient visit CXR, current visit CXR, and the previous visit report, to pre-fill the “findings” section of the patient’s current visit. We first gathered the longitudinal visit information for 26,625 patients from the MIMIC-CXR dataset, and created a new dataset called Longitudinal-MIMIC. With this new dataset, a transformer-based model was trained to capture the multi-modal longitudinal information from patient visit records (CXR images + reports) via a cross-attention-based multi-modal fusion module and a hierarchical memory-driven decoder. In contrast to previous works that only uses current visit data as input to train a model, our work exploits the longitudinal information available to pre-fill the “findings” section of radiology reports. Experiments show that our approach outperforms several recent approaches. Code will be published at https://github.com/CelestialShine/Longitudinal-Chest-X-Ray |
format | Online Article Text |
id | pubmed-10370215 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Cornell University |
record_format | MEDLINE/PubMed |
spelling | pubmed-103702152023-07-27 Utilizing Longitudinal Chest X-Rays and Reports to Pre-Fill Radiology Reports* Zhu, Qingqing Mathai, Tejas Sudharshan Mukherjee, Pritam Peng, Yifan Summers, Ronald M. Lu, Zhiyong ArXiv Article Despite the reduction in turn-around times in radiology reporting with the use of speech recognition software, persistent communication errors can significantly impact the interpretation of radiology reports. Pre-filling a radiology report holds promise in mitigating reporting errors, and despite multiple efforts in literature to generate comprehensive medical reports, there lacks approaches that exploit the longitudinal nature of patient visit records in the MIMIC-CXR dataset. To address this gap, we propose to use longitudinal multi-modal data, i.e., previous patient visit CXR, current visit CXR, and the previous visit report, to pre-fill the “findings” section of the patient’s current visit. We first gathered the longitudinal visit information for 26,625 patients from the MIMIC-CXR dataset, and created a new dataset called Longitudinal-MIMIC. With this new dataset, a transformer-based model was trained to capture the multi-modal longitudinal information from patient visit records (CXR images + reports) via a cross-attention-based multi-modal fusion module and a hierarchical memory-driven decoder. In contrast to previous works that only uses current visit data as input to train a model, our work exploits the longitudinal information available to pre-fill the “findings” section of radiology reports. Experiments show that our approach outperforms several recent approaches. Code will be published at https://github.com/CelestialShine/Longitudinal-Chest-X-Ray Cornell University 2023-10-10 /pmc/articles/PMC10370215/ /pubmed/37502627 Text en https://creativecommons.org/licenses/by/4.0/This work is licensed under a Creative Commons Attribution 4.0 International License (https://creativecommons.org/licenses/by/4.0/) , which allows reusers to distribute, remix, adapt, and build upon the material in any medium or format, so long as attribution is given to the creator. The license allows for commercial use. |
spellingShingle | Article Zhu, Qingqing Mathai, Tejas Sudharshan Mukherjee, Pritam Peng, Yifan Summers, Ronald M. Lu, Zhiyong Utilizing Longitudinal Chest X-Rays and Reports to Pre-Fill Radiology Reports* |
title | Utilizing Longitudinal Chest X-Rays and Reports to Pre-Fill Radiology Reports* |
title_full | Utilizing Longitudinal Chest X-Rays and Reports to Pre-Fill Radiology Reports* |
title_fullStr | Utilizing Longitudinal Chest X-Rays and Reports to Pre-Fill Radiology Reports* |
title_full_unstemmed | Utilizing Longitudinal Chest X-Rays and Reports to Pre-Fill Radiology Reports* |
title_short | Utilizing Longitudinal Chest X-Rays and Reports to Pre-Fill Radiology Reports* |
title_sort | utilizing longitudinal chest x-rays and reports to pre-fill radiology reports* |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10370215/ https://www.ncbi.nlm.nih.gov/pubmed/37502627 |
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