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Unravelling potential biomarkers for acute and chronic brucellosis through proteomic and bioinformatic approaches
INTRODUCTION: This study aimed to identify biomarkers for acute and chronic brucellosis using advanced proteomic and bioinformatic methods. METHODS: Blood samples from individuals with acute brucellosis, chronic brucellosis, and healthy controls were analyzed. Proteomic techniques and differential e...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10373591/ https://www.ncbi.nlm.nih.gov/pubmed/37520434 http://dx.doi.org/10.3389/fcimb.2023.1216176 |
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author | Yang, Yuejie Qiao, Kunyan Yu, Youren Zong, Yanmei Liu, Chang Li, Ying |
author_facet | Yang, Yuejie Qiao, Kunyan Yu, Youren Zong, Yanmei Liu, Chang Li, Ying |
author_sort | Yang, Yuejie |
collection | PubMed |
description | INTRODUCTION: This study aimed to identify biomarkers for acute and chronic brucellosis using advanced proteomic and bioinformatic methods. METHODS: Blood samples from individuals with acute brucellosis, chronic brucellosis, and healthy controls were analyzed. Proteomic techniques and differential expression analysis were used to identify differentially expressed proteins. Co-expression modules associated with brucellosis traits were identified using weighted gene co-expression network analysis (WGCNA). RESULTS: 763 differentially expressed proteins were identified, and two co-expression modules were found to be significantly associated with brucellosis traits. 25 proteins were differentially expressed in all three comparisons, and 20 hub proteins were identified. Nine proteins were found to be both differentially expressed and hub proteins, indicating their potential significance. A random forest model based on these nine proteins showed good classification performance. DISCUSSION: The identified proteins are involved in processes such as inflammation, coagulation, extracellular matrix regulation, and immune response. They provide insights into potential therapeutic targets and diagnostic biomarkers for brucellosis. This study improves our understanding of brucellosis at the molecular level and paves the way for further research in targeted therapies and diagnostics. |
format | Online Article Text |
id | pubmed-10373591 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-103735912023-07-28 Unravelling potential biomarkers for acute and chronic brucellosis through proteomic and bioinformatic approaches Yang, Yuejie Qiao, Kunyan Yu, Youren Zong, Yanmei Liu, Chang Li, Ying Front Cell Infect Microbiol Cellular and Infection Microbiology INTRODUCTION: This study aimed to identify biomarkers for acute and chronic brucellosis using advanced proteomic and bioinformatic methods. METHODS: Blood samples from individuals with acute brucellosis, chronic brucellosis, and healthy controls were analyzed. Proteomic techniques and differential expression analysis were used to identify differentially expressed proteins. Co-expression modules associated with brucellosis traits were identified using weighted gene co-expression network analysis (WGCNA). RESULTS: 763 differentially expressed proteins were identified, and two co-expression modules were found to be significantly associated with brucellosis traits. 25 proteins were differentially expressed in all three comparisons, and 20 hub proteins were identified. Nine proteins were found to be both differentially expressed and hub proteins, indicating their potential significance. A random forest model based on these nine proteins showed good classification performance. DISCUSSION: The identified proteins are involved in processes such as inflammation, coagulation, extracellular matrix regulation, and immune response. They provide insights into potential therapeutic targets and diagnostic biomarkers for brucellosis. This study improves our understanding of brucellosis at the molecular level and paves the way for further research in targeted therapies and diagnostics. Frontiers Media S.A. 2023-07-13 /pmc/articles/PMC10373591/ /pubmed/37520434 http://dx.doi.org/10.3389/fcimb.2023.1216176 Text en Copyright © 2023 Yang, Qiao, Yu, Zong, Liu and Li https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Cellular and Infection Microbiology Yang, Yuejie Qiao, Kunyan Yu, Youren Zong, Yanmei Liu, Chang Li, Ying Unravelling potential biomarkers for acute and chronic brucellosis through proteomic and bioinformatic approaches |
title | Unravelling potential biomarkers for acute and chronic brucellosis through proteomic and bioinformatic approaches |
title_full | Unravelling potential biomarkers for acute and chronic brucellosis through proteomic and bioinformatic approaches |
title_fullStr | Unravelling potential biomarkers for acute and chronic brucellosis through proteomic and bioinformatic approaches |
title_full_unstemmed | Unravelling potential biomarkers for acute and chronic brucellosis through proteomic and bioinformatic approaches |
title_short | Unravelling potential biomarkers for acute and chronic brucellosis through proteomic and bioinformatic approaches |
title_sort | unravelling potential biomarkers for acute and chronic brucellosis through proteomic and bioinformatic approaches |
topic | Cellular and Infection Microbiology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10373591/ https://www.ncbi.nlm.nih.gov/pubmed/37520434 http://dx.doi.org/10.3389/fcimb.2023.1216176 |
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