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microRNA sequencing for biomarker detection in the diagnosis, classification and prognosis of Diffuse Large B Cell Lymphoma

Despite being considered a single disease, Diffuse Large B Cell Lymphoma (DLBCL) presents with variable backgrounds, which results in heterogeneous outcomes among patients, with 40% of them still having primary refractory disease or relapse. Thus, novel biomarkers are needed. In addition, multiple f...

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Autores principales: Larrabeiti-Etxebarria, Ane, Bilbao-Aldaiturriaga, Nerea, Arzuaga-Mendez, Javier, Martin-Arruti, Maialen, Cozzuto, Luca, Gaafar, Ayman, Ruiz-Diaz, Irune, Guerra, Isabel, Martin-Guerrero, Idoia, Lopez-Lopez, Elixabet, Gutierrez-Camino, Angela
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10374576/
https://www.ncbi.nlm.nih.gov/pubmed/37500691
http://dx.doi.org/10.1038/s41598-023-39271-7
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author Larrabeiti-Etxebarria, Ane
Bilbao-Aldaiturriaga, Nerea
Arzuaga-Mendez, Javier
Martin-Arruti, Maialen
Cozzuto, Luca
Gaafar, Ayman
Ruiz-Diaz, Irune
Guerra, Isabel
Martin-Guerrero, Idoia
Lopez-Lopez, Elixabet
Gutierrez-Camino, Angela
author_facet Larrabeiti-Etxebarria, Ane
Bilbao-Aldaiturriaga, Nerea
Arzuaga-Mendez, Javier
Martin-Arruti, Maialen
Cozzuto, Luca
Gaafar, Ayman
Ruiz-Diaz, Irune
Guerra, Isabel
Martin-Guerrero, Idoia
Lopez-Lopez, Elixabet
Gutierrez-Camino, Angela
author_sort Larrabeiti-Etxebarria, Ane
collection PubMed
description Despite being considered a single disease, Diffuse Large B Cell Lymphoma (DLBCL) presents with variable backgrounds, which results in heterogeneous outcomes among patients, with 40% of them still having primary refractory disease or relapse. Thus, novel biomarkers are needed. In addition, multiple factors regarding its pathogenesis remain unclear. In this context, recent investigations point to the relevance of microRNAs (miRNAs) in cancer. However, regarding DLBCL, there is inconsistency in the data reported. Therefore, in this work, the main goals were to determine a miRNA set with utility as biomarkers for DLBCL diagnosis, classification, prognosis and treatment response, as well as to decipher the mechanism of action of deregulated miRNAs in the origin of the disease. We analyzed miRNA expression in a cohort of 78 DLBCL patients and 17 controls using small RNA sequencing and performed a miRNA-mRNA interaction network analysis. This way, we were able to define new miRNA expression signatures for diagnosis, classification, treatment response and prognosis, and we identified plausible mechanisms of action by which deregulated miRNAs could be involved in DLBCL pathogenesis. In summary, our study remarks that miRNAs could play an important role in DLBCL.
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spelling pubmed-103745762023-07-29 microRNA sequencing for biomarker detection in the diagnosis, classification and prognosis of Diffuse Large B Cell Lymphoma Larrabeiti-Etxebarria, Ane Bilbao-Aldaiturriaga, Nerea Arzuaga-Mendez, Javier Martin-Arruti, Maialen Cozzuto, Luca Gaafar, Ayman Ruiz-Diaz, Irune Guerra, Isabel Martin-Guerrero, Idoia Lopez-Lopez, Elixabet Gutierrez-Camino, Angela Sci Rep Article Despite being considered a single disease, Diffuse Large B Cell Lymphoma (DLBCL) presents with variable backgrounds, which results in heterogeneous outcomes among patients, with 40% of them still having primary refractory disease or relapse. Thus, novel biomarkers are needed. In addition, multiple factors regarding its pathogenesis remain unclear. In this context, recent investigations point to the relevance of microRNAs (miRNAs) in cancer. However, regarding DLBCL, there is inconsistency in the data reported. Therefore, in this work, the main goals were to determine a miRNA set with utility as biomarkers for DLBCL diagnosis, classification, prognosis and treatment response, as well as to decipher the mechanism of action of deregulated miRNAs in the origin of the disease. We analyzed miRNA expression in a cohort of 78 DLBCL patients and 17 controls using small RNA sequencing and performed a miRNA-mRNA interaction network analysis. This way, we were able to define new miRNA expression signatures for diagnosis, classification, treatment response and prognosis, and we identified plausible mechanisms of action by which deregulated miRNAs could be involved in DLBCL pathogenesis. In summary, our study remarks that miRNAs could play an important role in DLBCL. Nature Publishing Group UK 2023-07-27 /pmc/articles/PMC10374576/ /pubmed/37500691 http://dx.doi.org/10.1038/s41598-023-39271-7 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Article
Larrabeiti-Etxebarria, Ane
Bilbao-Aldaiturriaga, Nerea
Arzuaga-Mendez, Javier
Martin-Arruti, Maialen
Cozzuto, Luca
Gaafar, Ayman
Ruiz-Diaz, Irune
Guerra, Isabel
Martin-Guerrero, Idoia
Lopez-Lopez, Elixabet
Gutierrez-Camino, Angela
microRNA sequencing for biomarker detection in the diagnosis, classification and prognosis of Diffuse Large B Cell Lymphoma
title microRNA sequencing for biomarker detection in the diagnosis, classification and prognosis of Diffuse Large B Cell Lymphoma
title_full microRNA sequencing for biomarker detection in the diagnosis, classification and prognosis of Diffuse Large B Cell Lymphoma
title_fullStr microRNA sequencing for biomarker detection in the diagnosis, classification and prognosis of Diffuse Large B Cell Lymphoma
title_full_unstemmed microRNA sequencing for biomarker detection in the diagnosis, classification and prognosis of Diffuse Large B Cell Lymphoma
title_short microRNA sequencing for biomarker detection in the diagnosis, classification and prognosis of Diffuse Large B Cell Lymphoma
title_sort microrna sequencing for biomarker detection in the diagnosis, classification and prognosis of diffuse large b cell lymphoma
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10374576/
https://www.ncbi.nlm.nih.gov/pubmed/37500691
http://dx.doi.org/10.1038/s41598-023-39271-7
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