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Optical coherence tomography combined with convolutional neural networks can differentiate between intrahepatic cholangiocarcinoma and liver parenchyma ex vivo
PURPOSE: Surgical resection with complete tumor excision (R0) provides the best chance of long-term survival for patients with intrahepatic cholangiocarcinoma (iCCA). A non-invasive imaging technology, which could provide quick intraoperative assessment of resection margins, as an adjunct to histolo...
Autores principales: | , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer Berlin Heidelberg
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10374764/ https://www.ncbi.nlm.nih.gov/pubmed/37046121 http://dx.doi.org/10.1007/s00432-023-04742-x |
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author | Wolff, Laura I. Hachgenei, Enno Goßmann, Paul Druzenko, Mariia Frye, Maik König, Niels Schmitt, Robert H. Chrysos, Alexandros Jöchle, Katharina Truhn, Daniel Kather, Jakob Nikolas Lambertz, Andreas Gaisa, Nadine T. Jonigk, Danny Ulmer, Tom F. Neumann, Ulf P. Lang, Sven A. Amygdalos, Iakovos |
author_facet | Wolff, Laura I. Hachgenei, Enno Goßmann, Paul Druzenko, Mariia Frye, Maik König, Niels Schmitt, Robert H. Chrysos, Alexandros Jöchle, Katharina Truhn, Daniel Kather, Jakob Nikolas Lambertz, Andreas Gaisa, Nadine T. Jonigk, Danny Ulmer, Tom F. Neumann, Ulf P. Lang, Sven A. Amygdalos, Iakovos |
author_sort | Wolff, Laura I. |
collection | PubMed |
description | PURPOSE: Surgical resection with complete tumor excision (R0) provides the best chance of long-term survival for patients with intrahepatic cholangiocarcinoma (iCCA). A non-invasive imaging technology, which could provide quick intraoperative assessment of resection margins, as an adjunct to histological examination, is optical coherence tomography (OCT). In this study, we investigated the ability of OCT combined with convolutional neural networks (CNN), to differentiate iCCA from normal liver parenchyma ex vivo. METHODS: Consecutive adult patients undergoing elective liver resections for iCCA between June 2020 and April 2021 (n = 11) were included in this study. Areas of interest from resection specimens were scanned ex vivo, before formalin fixation, using a table-top OCT device at 1310 nm wavelength. Scanned areas were marked and histologically examined, providing a diagnosis for each scan. An Xception CNN was trained, validated, and tested in matching OCT scans to their corresponding histological diagnoses, through a 5 × 5 stratified cross-validation process. RESULTS: Twenty-four three-dimensional scans (corresponding to approx. 85,603 individual) from ten patients were included in the analysis. In 5 × 5 cross-validation, the model achieved a mean F1-score, sensitivity, and specificity of 0.94, 0.94, and 0.93, respectively. CONCLUSION: Optical coherence tomography combined with CNN can differentiate iCCA from liver parenchyma ex vivo. Further studies are necessary to expand on these results and lead to innovative in vivo OCT applications, such as intraoperative or endoscopic scanning. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s00432-023-04742-x. |
format | Online Article Text |
id | pubmed-10374764 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Springer Berlin Heidelberg |
record_format | MEDLINE/PubMed |
spelling | pubmed-103747642023-07-29 Optical coherence tomography combined with convolutional neural networks can differentiate between intrahepatic cholangiocarcinoma and liver parenchyma ex vivo Wolff, Laura I. Hachgenei, Enno Goßmann, Paul Druzenko, Mariia Frye, Maik König, Niels Schmitt, Robert H. Chrysos, Alexandros Jöchle, Katharina Truhn, Daniel Kather, Jakob Nikolas Lambertz, Andreas Gaisa, Nadine T. Jonigk, Danny Ulmer, Tom F. Neumann, Ulf P. Lang, Sven A. Amygdalos, Iakovos J Cancer Res Clin Oncol Research PURPOSE: Surgical resection with complete tumor excision (R0) provides the best chance of long-term survival for patients with intrahepatic cholangiocarcinoma (iCCA). A non-invasive imaging technology, which could provide quick intraoperative assessment of resection margins, as an adjunct to histological examination, is optical coherence tomography (OCT). In this study, we investigated the ability of OCT combined with convolutional neural networks (CNN), to differentiate iCCA from normal liver parenchyma ex vivo. METHODS: Consecutive adult patients undergoing elective liver resections for iCCA between June 2020 and April 2021 (n = 11) were included in this study. Areas of interest from resection specimens were scanned ex vivo, before formalin fixation, using a table-top OCT device at 1310 nm wavelength. Scanned areas were marked and histologically examined, providing a diagnosis for each scan. An Xception CNN was trained, validated, and tested in matching OCT scans to their corresponding histological diagnoses, through a 5 × 5 stratified cross-validation process. RESULTS: Twenty-four three-dimensional scans (corresponding to approx. 85,603 individual) from ten patients were included in the analysis. In 5 × 5 cross-validation, the model achieved a mean F1-score, sensitivity, and specificity of 0.94, 0.94, and 0.93, respectively. CONCLUSION: Optical coherence tomography combined with CNN can differentiate iCCA from liver parenchyma ex vivo. Further studies are necessary to expand on these results and lead to innovative in vivo OCT applications, such as intraoperative or endoscopic scanning. SUPPLEMENTARY INFORMATION: The online version contains supplementary material available at 10.1007/s00432-023-04742-x. Springer Berlin Heidelberg 2023-04-12 2023 /pmc/articles/PMC10374764/ /pubmed/37046121 http://dx.doi.org/10.1007/s00432-023-04742-x Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Research Wolff, Laura I. Hachgenei, Enno Goßmann, Paul Druzenko, Mariia Frye, Maik König, Niels Schmitt, Robert H. Chrysos, Alexandros Jöchle, Katharina Truhn, Daniel Kather, Jakob Nikolas Lambertz, Andreas Gaisa, Nadine T. Jonigk, Danny Ulmer, Tom F. Neumann, Ulf P. Lang, Sven A. Amygdalos, Iakovos Optical coherence tomography combined with convolutional neural networks can differentiate between intrahepatic cholangiocarcinoma and liver parenchyma ex vivo |
title | Optical coherence tomography combined with convolutional neural networks can differentiate between intrahepatic cholangiocarcinoma and liver parenchyma ex vivo |
title_full | Optical coherence tomography combined with convolutional neural networks can differentiate between intrahepatic cholangiocarcinoma and liver parenchyma ex vivo |
title_fullStr | Optical coherence tomography combined with convolutional neural networks can differentiate between intrahepatic cholangiocarcinoma and liver parenchyma ex vivo |
title_full_unstemmed | Optical coherence tomography combined with convolutional neural networks can differentiate between intrahepatic cholangiocarcinoma and liver parenchyma ex vivo |
title_short | Optical coherence tomography combined with convolutional neural networks can differentiate between intrahepatic cholangiocarcinoma and liver parenchyma ex vivo |
title_sort | optical coherence tomography combined with convolutional neural networks can differentiate between intrahepatic cholangiocarcinoma and liver parenchyma ex vivo |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10374764/ https://www.ncbi.nlm.nih.gov/pubmed/37046121 http://dx.doi.org/10.1007/s00432-023-04742-x |
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