Exploring Less Invasive Visual Surveys to Assess the Spatial Distribution of Endangered Mediterranean Trout Population in a Small Intermittent Stream

SIMPLE SUMMARY: This study explores the use of alternative and non-harmful methods for monitoring endangered Mediterranean trout in small intermittent streams. Specifically, two visual survey techniques were compared: a visual survey from streambanks and an underwater visual survey using underwater cameras. The main objective was to assess the effectiveness of detecting patterns in fish occupancy in relation to a set of environmental factors. The comparison revealed that underwater camera surveys performed similarity to visual surveys from streambanks during low-flow regimes. However, visual surveys from streambanks were less effective during the highest flow regimes. The volume of pools and the percentage cover of submerged macrophytes were found to be significant environmental variables affecting fish detection probability using underwater cameras. On the other hand, the analysis of data from visual observations from streambanks indicated a clear impact of high turbulence rates on pool occupancy. In conclusion, these findings demonstrate the utility of visual methods in describing the occupancy patterns of Mediterranean trout in small streams. ABSTRACT: Monitoring the conservation status of endangered freshwater fish using less invasive methods poses challenges for ecologists and conservationists. Visual surveys have been proposed as an alternative to electrofishing, which is a standard methodology that can cause injuries, physiological stress and post-release mortality in organisms. To test the efficacy of visual methods, a study was conducted in an intermittent stream of Sardinia (Italy). Two visual methods were employed: a visual survey from streambanks (VSS) and an underwater visual survey (UVS) using cameras. The aims of this study were (1) to compare the effectiveness of these methods in detecting patch occupancy patterns and (2) to investigate the effect of environmental variables on the detection probability of Mediterranean native trout. Environmental variables characterizing pool habitats were recorded, and generalized linear models (GLMs) were employed to assess the correlation between these variables and trout presence/absence. GLM analysis revealed that UVS had higher detection probability with larger pool volume, whereas submerged macrophytes negatively affected detection probability. Detection from streambanks (VVS) was negatively affected by a high turbulence rate. In conclusion, our study suggests the utility of visual methods to describe patterns of patch occupancy of Mediterranean trout. However, methods can be differently affected by environmental variables. Therefore, monitoring programs using these methods should consider these factors to ensure a reliable description of within-stream trout distribution in intermittent streams.