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AFNet Algorithm for Automatic Amniotic Fluid Segmentation from Fetal MRI
Amniotic Fluid Volume (AFV) is a crucial fetal biomarker when diagnosing specific fetal abnormalities. This study proposes a novel Convolutional Neural Network (CNN) model, AFNet, for segmenting amniotic fluid (AF) to facilitate clinical AFV evaluation. AFNet was trained and tested on a manually seg...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10376488/ https://www.ncbi.nlm.nih.gov/pubmed/37508809 http://dx.doi.org/10.3390/bioengineering10070783 |
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author | Costanzo, Alejo Ertl-Wagner, Birgit Sussman, Dafna |
author_facet | Costanzo, Alejo Ertl-Wagner, Birgit Sussman, Dafna |
author_sort | Costanzo, Alejo |
collection | PubMed |
description | Amniotic Fluid Volume (AFV) is a crucial fetal biomarker when diagnosing specific fetal abnormalities. This study proposes a novel Convolutional Neural Network (CNN) model, AFNet, for segmenting amniotic fluid (AF) to facilitate clinical AFV evaluation. AFNet was trained and tested on a manually segmented and radiologist-validated AF dataset. AFNet outperforms ResUNet++ by using efficient feature mapping in the attention block and transposing convolutions in the decoder. Our experimental results show that AFNet achieved a mean Intersection over Union (mIoU) of 93.38% on our dataset, thereby outperforming other state-of-the-art models. While AFNet achieves performance scores similar to those of the UNet++ model, it does so while utilizing merely less than half the number of parameters. By creating a detailed AF dataset with an improved CNN architecture, we enable the quantification of AFV in clinical practice, which can aid in diagnosing AF disorders during gestation. |
format | Online Article Text |
id | pubmed-10376488 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-103764882023-07-29 AFNet Algorithm for Automatic Amniotic Fluid Segmentation from Fetal MRI Costanzo, Alejo Ertl-Wagner, Birgit Sussman, Dafna Bioengineering (Basel) Article Amniotic Fluid Volume (AFV) is a crucial fetal biomarker when diagnosing specific fetal abnormalities. This study proposes a novel Convolutional Neural Network (CNN) model, AFNet, for segmenting amniotic fluid (AF) to facilitate clinical AFV evaluation. AFNet was trained and tested on a manually segmented and radiologist-validated AF dataset. AFNet outperforms ResUNet++ by using efficient feature mapping in the attention block and transposing convolutions in the decoder. Our experimental results show that AFNet achieved a mean Intersection over Union (mIoU) of 93.38% on our dataset, thereby outperforming other state-of-the-art models. While AFNet achieves performance scores similar to those of the UNet++ model, it does so while utilizing merely less than half the number of parameters. By creating a detailed AF dataset with an improved CNN architecture, we enable the quantification of AFV in clinical practice, which can aid in diagnosing AF disorders during gestation. MDPI 2023-06-30 /pmc/articles/PMC10376488/ /pubmed/37508809 http://dx.doi.org/10.3390/bioengineering10070783 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Costanzo, Alejo Ertl-Wagner, Birgit Sussman, Dafna AFNet Algorithm for Automatic Amniotic Fluid Segmentation from Fetal MRI |
title | AFNet Algorithm for Automatic Amniotic Fluid Segmentation from Fetal MRI |
title_full | AFNet Algorithm for Automatic Amniotic Fluid Segmentation from Fetal MRI |
title_fullStr | AFNet Algorithm for Automatic Amniotic Fluid Segmentation from Fetal MRI |
title_full_unstemmed | AFNet Algorithm for Automatic Amniotic Fluid Segmentation from Fetal MRI |
title_short | AFNet Algorithm for Automatic Amniotic Fluid Segmentation from Fetal MRI |
title_sort | afnet algorithm for automatic amniotic fluid segmentation from fetal mri |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10376488/ https://www.ncbi.nlm.nih.gov/pubmed/37508809 http://dx.doi.org/10.3390/bioengineering10070783 |
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