Cargando…

Detection of Hindwing Landmarks Using Transfer Learning and High-Resolution Networks

SIMPLE SUMMARY: The landmark annotation of hindwing venation is one of the most important methods in the hindwing morphological, functional, and evolutionary analysis of beetles, and the number of the landmark samples greatly affects the effectiveness of these analysis. However, large-scale manual l...

Descripción completa

Detalles Bibliográficos
Autores principales: Yang, Yi, Liu, Xiaokun, Li, Wenjie, Li, Congqiao, Ma, Ge, Yang, Guangqin, Ren, Jing, Ge, Siqin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10376506/
https://www.ncbi.nlm.nih.gov/pubmed/37508435
http://dx.doi.org/10.3390/biology12071006
_version_ 1785079287523573760
author Yang, Yi
Liu, Xiaokun
Li, Wenjie
Li, Congqiao
Ma, Ge
Yang, Guangqin
Ren, Jing
Ge, Siqin
author_facet Yang, Yi
Liu, Xiaokun
Li, Wenjie
Li, Congqiao
Ma, Ge
Yang, Guangqin
Ren, Jing
Ge, Siqin
author_sort Yang, Yi
collection PubMed
description SIMPLE SUMMARY: The landmark annotation of hindwing venation is one of the most important methods in the hindwing morphological, functional, and evolutionary analysis of beetles, and the number of the landmark samples greatly affects the effectiveness of these analysis. However, large-scale manual landmark annotation is a time-consuming task that hinders the progress of wing morphology research. Some machine learning techniques have been applied to beetle image recognition, but the lack of data for beetle hindwing landmarks limits the use of machine learning for beetle hindwing landmark detection. In this study, we propose a new approach to solve the problem of insufficient training samples for beetle hindwing landmark detection, by fine-tuning a new deep high-resolution convolutional neural network pretrained on a natural image database to transfer it to the domain of beetle hindwings. The results of experiments shows the effectiveness of this new approach as it demonstrated small error in the detection of leaf beetle hindwing landmarks and required a very low number of samples. ABSTRACT: Hindwing venation is one of the most important morphological features for the functional and evolutionary analysis of beetles, as it is one of the key features used for the analysis of beetle flight performance and the design of beetle-like flapping wing micro aerial vehicles. However, manual landmark annotation for hindwing morphological analysis is a time-consuming process hindering the development of wing morphology research. In this paper, we present a novel approach for the detection of landmarks on the hindwings of leaf beetles (Coleoptera, Chrysomelidae) using a limited number of samples. The proposed method entails the transfer of a pre-existing model, trained on a large natural image dataset, to the specific domain of leaf beetle hindwings. This is achieved by using a deep high-resolution network as the backbone. The low-stage network parameters are frozen, while the high-stage parameters are re-trained to construct a leaf beetle hindwing landmark detection model. A leaf beetle hindwing landmark dataset was constructed, and the network was trained on varying numbers of randomly selected hindwing samples. The results demonstrate that the average detection normalized mean error for specific landmarks of leaf beetle hindwings (100 samples) remains below 0.02 and only reached 0.045 when using a mere three samples for training. Comparative analyses reveal that the proposed approach out-performs a prevalently used method (i.e., a deep residual network). This study showcases the practicability of employing natural images—specifically, those in ImageNet—for the purpose of pre-training leaf beetle hindwing landmark detection models in particular, providing a promising approach for insect wing venation digitization.
format Online
Article
Text
id pubmed-10376506
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-103765062023-07-29 Detection of Hindwing Landmarks Using Transfer Learning and High-Resolution Networks Yang, Yi Liu, Xiaokun Li, Wenjie Li, Congqiao Ma, Ge Yang, Guangqin Ren, Jing Ge, Siqin Biology (Basel) Article SIMPLE SUMMARY: The landmark annotation of hindwing venation is one of the most important methods in the hindwing morphological, functional, and evolutionary analysis of beetles, and the number of the landmark samples greatly affects the effectiveness of these analysis. However, large-scale manual landmark annotation is a time-consuming task that hinders the progress of wing morphology research. Some machine learning techniques have been applied to beetle image recognition, but the lack of data for beetle hindwing landmarks limits the use of machine learning for beetle hindwing landmark detection. In this study, we propose a new approach to solve the problem of insufficient training samples for beetle hindwing landmark detection, by fine-tuning a new deep high-resolution convolutional neural network pretrained on a natural image database to transfer it to the domain of beetle hindwings. The results of experiments shows the effectiveness of this new approach as it demonstrated small error in the detection of leaf beetle hindwing landmarks and required a very low number of samples. ABSTRACT: Hindwing venation is one of the most important morphological features for the functional and evolutionary analysis of beetles, as it is one of the key features used for the analysis of beetle flight performance and the design of beetle-like flapping wing micro aerial vehicles. However, manual landmark annotation for hindwing morphological analysis is a time-consuming process hindering the development of wing morphology research. In this paper, we present a novel approach for the detection of landmarks on the hindwings of leaf beetles (Coleoptera, Chrysomelidae) using a limited number of samples. The proposed method entails the transfer of a pre-existing model, trained on a large natural image dataset, to the specific domain of leaf beetle hindwings. This is achieved by using a deep high-resolution network as the backbone. The low-stage network parameters are frozen, while the high-stage parameters are re-trained to construct a leaf beetle hindwing landmark detection model. A leaf beetle hindwing landmark dataset was constructed, and the network was trained on varying numbers of randomly selected hindwing samples. The results demonstrate that the average detection normalized mean error for specific landmarks of leaf beetle hindwings (100 samples) remains below 0.02 and only reached 0.045 when using a mere three samples for training. Comparative analyses reveal that the proposed approach out-performs a prevalently used method (i.e., a deep residual network). This study showcases the practicability of employing natural images—specifically, those in ImageNet—for the purpose of pre-training leaf beetle hindwing landmark detection models in particular, providing a promising approach for insect wing venation digitization. MDPI 2023-07-14 /pmc/articles/PMC10376506/ /pubmed/37508435 http://dx.doi.org/10.3390/biology12071006 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Yang, Yi
Liu, Xiaokun
Li, Wenjie
Li, Congqiao
Ma, Ge
Yang, Guangqin
Ren, Jing
Ge, Siqin
Detection of Hindwing Landmarks Using Transfer Learning and High-Resolution Networks
title Detection of Hindwing Landmarks Using Transfer Learning and High-Resolution Networks
title_full Detection of Hindwing Landmarks Using Transfer Learning and High-Resolution Networks
title_fullStr Detection of Hindwing Landmarks Using Transfer Learning and High-Resolution Networks
title_full_unstemmed Detection of Hindwing Landmarks Using Transfer Learning and High-Resolution Networks
title_short Detection of Hindwing Landmarks Using Transfer Learning and High-Resolution Networks
title_sort detection of hindwing landmarks using transfer learning and high-resolution networks
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10376506/
https://www.ncbi.nlm.nih.gov/pubmed/37508435
http://dx.doi.org/10.3390/biology12071006
work_keys_str_mv AT yangyi detectionofhindwinglandmarksusingtransferlearningandhighresolutionnetworks
AT liuxiaokun detectionofhindwinglandmarksusingtransferlearningandhighresolutionnetworks
AT liwenjie detectionofhindwinglandmarksusingtransferlearningandhighresolutionnetworks
AT licongqiao detectionofhindwinglandmarksusingtransferlearningandhighresolutionnetworks
AT mage detectionofhindwinglandmarksusingtransferlearningandhighresolutionnetworks
AT yangguangqin detectionofhindwinglandmarksusingtransferlearningandhighresolutionnetworks
AT renjing detectionofhindwinglandmarksusingtransferlearningandhighresolutionnetworks
AT gesiqin detectionofhindwinglandmarksusingtransferlearningandhighresolutionnetworks