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A Metagenome from a Steam Vent in Los Azufres Geothermal Field Shows an Abundance of Thermoplasmatales archaea and Bacteria from the Phyla Actinomycetota and Pseudomonadota

Los Azufres National Park is a geothermal field that has a wide number of thermal manifestations; nevertheless, the microbial communities in many of these environments remain unknown. In this study, a metagenome from a sediment sample from Los Azufres National Park was sequenced. In this metagenome,...

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Autores principales: Marín-Paredes, Roberto, Bolívar-Torres, Hermes H., Coronel-Gaytán, Alberto, Martínez-Romero, Esperanza, Servín-Garcidueñas, Luis E.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10378326/
https://www.ncbi.nlm.nih.gov/pubmed/37504286
http://dx.doi.org/10.3390/cimb45070370
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author Marín-Paredes, Roberto
Bolívar-Torres, Hermes H.
Coronel-Gaytán, Alberto
Martínez-Romero, Esperanza
Servín-Garcidueñas, Luis E.
author_facet Marín-Paredes, Roberto
Bolívar-Torres, Hermes H.
Coronel-Gaytán, Alberto
Martínez-Romero, Esperanza
Servín-Garcidueñas, Luis E.
author_sort Marín-Paredes, Roberto
collection PubMed
description Los Azufres National Park is a geothermal field that has a wide number of thermal manifestations; nevertheless, the microbial communities in many of these environments remain unknown. In this study, a metagenome from a sediment sample from Los Azufres National Park was sequenced. In this metagenome, we found that the microbial diversity corresponds to bacteria (Actinomycetota, Pseudomonadota), archaea (Thermoplasmatales and Candidatus Micrarchaeota and Candidatus Parvarchaeota), eukarya (Cyanidiaceae), and viruses (Fussellovirus and Caudoviricetes). The functional annotation showed genes related to the carbon fixation pathway, sulfur metabolism, genes involved in heat and cold shock, and heavy-metal resistance. From the sediment, it was possible to recover two metagenome-assembled genomes from Ferrimicrobium and Cuniculiplasma. Our results showed that there are a large number of microorganisms in Los Azufres that deserve to be studied.
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spelling pubmed-103783262023-07-29 A Metagenome from a Steam Vent in Los Azufres Geothermal Field Shows an Abundance of Thermoplasmatales archaea and Bacteria from the Phyla Actinomycetota and Pseudomonadota Marín-Paredes, Roberto Bolívar-Torres, Hermes H. Coronel-Gaytán, Alberto Martínez-Romero, Esperanza Servín-Garcidueñas, Luis E. Curr Issues Mol Biol Article Los Azufres National Park is a geothermal field that has a wide number of thermal manifestations; nevertheless, the microbial communities in many of these environments remain unknown. In this study, a metagenome from a sediment sample from Los Azufres National Park was sequenced. In this metagenome, we found that the microbial diversity corresponds to bacteria (Actinomycetota, Pseudomonadota), archaea (Thermoplasmatales and Candidatus Micrarchaeota and Candidatus Parvarchaeota), eukarya (Cyanidiaceae), and viruses (Fussellovirus and Caudoviricetes). The functional annotation showed genes related to the carbon fixation pathway, sulfur metabolism, genes involved in heat and cold shock, and heavy-metal resistance. From the sediment, it was possible to recover two metagenome-assembled genomes from Ferrimicrobium and Cuniculiplasma. Our results showed that there are a large number of microorganisms in Los Azufres that deserve to be studied. MDPI 2023-07-13 /pmc/articles/PMC10378326/ /pubmed/37504286 http://dx.doi.org/10.3390/cimb45070370 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Marín-Paredes, Roberto
Bolívar-Torres, Hermes H.
Coronel-Gaytán, Alberto
Martínez-Romero, Esperanza
Servín-Garcidueñas, Luis E.
A Metagenome from a Steam Vent in Los Azufres Geothermal Field Shows an Abundance of Thermoplasmatales archaea and Bacteria from the Phyla Actinomycetota and Pseudomonadota
title A Metagenome from a Steam Vent in Los Azufres Geothermal Field Shows an Abundance of Thermoplasmatales archaea and Bacteria from the Phyla Actinomycetota and Pseudomonadota
title_full A Metagenome from a Steam Vent in Los Azufres Geothermal Field Shows an Abundance of Thermoplasmatales archaea and Bacteria from the Phyla Actinomycetota and Pseudomonadota
title_fullStr A Metagenome from a Steam Vent in Los Azufres Geothermal Field Shows an Abundance of Thermoplasmatales archaea and Bacteria from the Phyla Actinomycetota and Pseudomonadota
title_full_unstemmed A Metagenome from a Steam Vent in Los Azufres Geothermal Field Shows an Abundance of Thermoplasmatales archaea and Bacteria from the Phyla Actinomycetota and Pseudomonadota
title_short A Metagenome from a Steam Vent in Los Azufres Geothermal Field Shows an Abundance of Thermoplasmatales archaea and Bacteria from the Phyla Actinomycetota and Pseudomonadota
title_sort metagenome from a steam vent in los azufres geothermal field shows an abundance of thermoplasmatales archaea and bacteria from the phyla actinomycetota and pseudomonadota
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10378326/
https://www.ncbi.nlm.nih.gov/pubmed/37504286
http://dx.doi.org/10.3390/cimb45070370
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