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Based on network pharmacology and molecular docking to predict the mechanism of TMDZ capsule in the treatment of IS

Ischemic stroke (IS) is the most common cardiovascular and cerebrovascular disease in clinic. Qiangli Tianma Duzhong Capsule (TMDZ capsule) has significant therapeutic effect to IS. Therefore, it is great significance to explore the mechanism of action of TMDZ capsules in the treatment of IS. METHOD...

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Autores principales: Yang, Fengjiao, Gu, Yun, Yan, Ya, Wang, Guangming
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Lippincott Williams & Wilkins 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10378803/
https://www.ncbi.nlm.nih.gov/pubmed/37505183
http://dx.doi.org/10.1097/MD.0000000000034424
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author Yang, Fengjiao
Gu, Yun
Yan, Ya
Wang, Guangming
author_facet Yang, Fengjiao
Gu, Yun
Yan, Ya
Wang, Guangming
author_sort Yang, Fengjiao
collection PubMed
description Ischemic stroke (IS) is the most common cardiovascular and cerebrovascular disease in clinic. Qiangli Tianma Duzhong Capsule (TMDZ capsule) has significant therapeutic effect to IS. Therefore, it is great significance to explore the mechanism of action of TMDZ capsules in the treatment of IS. METHODS: The potential active components and possible targets of TMDZ capsule were obtained from TCMSP and The Encyclopedia of Traditional Chinese Medicine databases. IS related targets were collected by Genecard database, OMIM database, TTD database and DisGeNET database. The common target network of drug-diseases was constructed using Cytoscape for visualization analysis. Potential mechanisms were identified through enrichment analysis of gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG). Three key targets (ALB, TNF, and INS) were selected from the key networks with high correlation scores in PPI for molecular docking, through molecular docking, the interaction between target and protein is visualized. RESULTS: 59 active components and 648 targets of TMDZ capsules and 2286 targets of IS were obtained through database mining. Compound-target network is constructed with 117 nodes and 1185 edges. GO and KEGG suggest that lipids and atherosclerosis, fluid shear forces and atherosclerosis, neurodegenerative pathways – multiple diseases and blood circulation play important roles in the treatment of IS. CONCLUSIONS: This study reveals the molecular mechanism of TMDZ capsules in the treatment of IS by integrating molecular docking with a network pharmacological strategy, which not only confirmed the clinical efficacy of TMDZ capsule, but also laid the foundation for further experimental research.
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spelling pubmed-103788032023-07-29 Based on network pharmacology and molecular docking to predict the mechanism of TMDZ capsule in the treatment of IS Yang, Fengjiao Gu, Yun Yan, Ya Wang, Guangming Medicine (Baltimore) Research Article: Clinical Trial/Experimental Study Ischemic stroke (IS) is the most common cardiovascular and cerebrovascular disease in clinic. Qiangli Tianma Duzhong Capsule (TMDZ capsule) has significant therapeutic effect to IS. Therefore, it is great significance to explore the mechanism of action of TMDZ capsules in the treatment of IS. METHODS: The potential active components and possible targets of TMDZ capsule were obtained from TCMSP and The Encyclopedia of Traditional Chinese Medicine databases. IS related targets were collected by Genecard database, OMIM database, TTD database and DisGeNET database. The common target network of drug-diseases was constructed using Cytoscape for visualization analysis. Potential mechanisms were identified through enrichment analysis of gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG). Three key targets (ALB, TNF, and INS) were selected from the key networks with high correlation scores in PPI for molecular docking, through molecular docking, the interaction between target and protein is visualized. RESULTS: 59 active components and 648 targets of TMDZ capsules and 2286 targets of IS were obtained through database mining. Compound-target network is constructed with 117 nodes and 1185 edges. GO and KEGG suggest that lipids and atherosclerosis, fluid shear forces and atherosclerosis, neurodegenerative pathways – multiple diseases and blood circulation play important roles in the treatment of IS. CONCLUSIONS: This study reveals the molecular mechanism of TMDZ capsules in the treatment of IS by integrating molecular docking with a network pharmacological strategy, which not only confirmed the clinical efficacy of TMDZ capsule, but also laid the foundation for further experimental research. Lippincott Williams & Wilkins 2023-07-28 /pmc/articles/PMC10378803/ /pubmed/37505183 http://dx.doi.org/10.1097/MD.0000000000034424 Text en Copyright © 2023 the Author(s). Published by Wolters Kluwer Health, Inc. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License 4.0 (CCBY) (https://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article: Clinical Trial/Experimental Study
Yang, Fengjiao
Gu, Yun
Yan, Ya
Wang, Guangming
Based on network pharmacology and molecular docking to predict the mechanism of TMDZ capsule in the treatment of IS
title Based on network pharmacology and molecular docking to predict the mechanism of TMDZ capsule in the treatment of IS
title_full Based on network pharmacology and molecular docking to predict the mechanism of TMDZ capsule in the treatment of IS
title_fullStr Based on network pharmacology and molecular docking to predict the mechanism of TMDZ capsule in the treatment of IS
title_full_unstemmed Based on network pharmacology and molecular docking to predict the mechanism of TMDZ capsule in the treatment of IS
title_short Based on network pharmacology and molecular docking to predict the mechanism of TMDZ capsule in the treatment of IS
title_sort based on network pharmacology and molecular docking to predict the mechanism of tmdz capsule in the treatment of is
topic Research Article: Clinical Trial/Experimental Study
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10378803/
https://www.ncbi.nlm.nih.gov/pubmed/37505183
http://dx.doi.org/10.1097/MD.0000000000034424
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