Cargando…

Identification of the Light-Harvesting Chlorophyll a/b Binding Protein Gene Family in Peach (Prunus persica L.) and Their Expression under Drought Stress

In higher plants, light-harvesting chlorophyll a/b binding (Lhc) proteins play a vital role in photosynthetic processes and are widely involved in the regulation of plant growth, development, and response to abiotic stress. However, the Lhc gene family has not been well identified in peaches (Prunus...

Descripción completa

Detalles Bibliográficos
Autores principales: Wang, Li, Wei, Jia, Shi, Xingyun, Qian, Weihong, Mehmood, Jan, Yin, Yiming, Jia, Huijuan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10378835/
https://www.ncbi.nlm.nih.gov/pubmed/37510379
http://dx.doi.org/10.3390/genes14071475
_version_ 1785079864649318400
author Wang, Li
Wei, Jia
Shi, Xingyun
Qian, Weihong
Mehmood, Jan
Yin, Yiming
Jia, Huijuan
author_facet Wang, Li
Wei, Jia
Shi, Xingyun
Qian, Weihong
Mehmood, Jan
Yin, Yiming
Jia, Huijuan
author_sort Wang, Li
collection PubMed
description In higher plants, light-harvesting chlorophyll a/b binding (Lhc) proteins play a vital role in photosynthetic processes and are widely involved in the regulation of plant growth, development, and response to abiotic stress. However, the Lhc gene family has not been well identified in peaches (Prunus persica L.). In this study, 19 PpLhc genes were identified in the peach genome database, which were unevenly distributed on all chromosomes. Phylogenetic analysis demonstrated that PpLhc proteins could be divided into three major subfamilies, each of whose members had different exon–intron structures but shared similar conserved motifs. A total of 17 different kinds of cis-regulatory elements were identified in the promoter regions of all PpLhc genes, which could be classified into three categories: plant growth and development, stress response, and phytohormone response. In addition, transcriptomic data analysis and RT-qPCR results revealed that the expression profiles of some PpLhc genes changed under drought treatment, suggesting the crucial roles of Lhc genes in the regulation of plant tolerance to drought stress. Taken together, these findings will provide valuable information for future functional studies of PpLhc genes, especially in response to drought stress.
format Online
Article
Text
id pubmed-10378835
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-103788352023-07-29 Identification of the Light-Harvesting Chlorophyll a/b Binding Protein Gene Family in Peach (Prunus persica L.) and Their Expression under Drought Stress Wang, Li Wei, Jia Shi, Xingyun Qian, Weihong Mehmood, Jan Yin, Yiming Jia, Huijuan Genes (Basel) Article In higher plants, light-harvesting chlorophyll a/b binding (Lhc) proteins play a vital role in photosynthetic processes and are widely involved in the regulation of plant growth, development, and response to abiotic stress. However, the Lhc gene family has not been well identified in peaches (Prunus persica L.). In this study, 19 PpLhc genes were identified in the peach genome database, which were unevenly distributed on all chromosomes. Phylogenetic analysis demonstrated that PpLhc proteins could be divided into three major subfamilies, each of whose members had different exon–intron structures but shared similar conserved motifs. A total of 17 different kinds of cis-regulatory elements were identified in the promoter regions of all PpLhc genes, which could be classified into three categories: plant growth and development, stress response, and phytohormone response. In addition, transcriptomic data analysis and RT-qPCR results revealed that the expression profiles of some PpLhc genes changed under drought treatment, suggesting the crucial roles of Lhc genes in the regulation of plant tolerance to drought stress. Taken together, these findings will provide valuable information for future functional studies of PpLhc genes, especially in response to drought stress. MDPI 2023-07-19 /pmc/articles/PMC10378835/ /pubmed/37510379 http://dx.doi.org/10.3390/genes14071475 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Wang, Li
Wei, Jia
Shi, Xingyun
Qian, Weihong
Mehmood, Jan
Yin, Yiming
Jia, Huijuan
Identification of the Light-Harvesting Chlorophyll a/b Binding Protein Gene Family in Peach (Prunus persica L.) and Their Expression under Drought Stress
title Identification of the Light-Harvesting Chlorophyll a/b Binding Protein Gene Family in Peach (Prunus persica L.) and Their Expression under Drought Stress
title_full Identification of the Light-Harvesting Chlorophyll a/b Binding Protein Gene Family in Peach (Prunus persica L.) and Their Expression under Drought Stress
title_fullStr Identification of the Light-Harvesting Chlorophyll a/b Binding Protein Gene Family in Peach (Prunus persica L.) and Their Expression under Drought Stress
title_full_unstemmed Identification of the Light-Harvesting Chlorophyll a/b Binding Protein Gene Family in Peach (Prunus persica L.) and Their Expression under Drought Stress
title_short Identification of the Light-Harvesting Chlorophyll a/b Binding Protein Gene Family in Peach (Prunus persica L.) and Their Expression under Drought Stress
title_sort identification of the light-harvesting chlorophyll a/b binding protein gene family in peach (prunus persica l.) and their expression under drought stress
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10378835/
https://www.ncbi.nlm.nih.gov/pubmed/37510379
http://dx.doi.org/10.3390/genes14071475
work_keys_str_mv AT wangli identificationofthelightharvestingchlorophyllabbindingproteingenefamilyinpeachprunuspersicalandtheirexpressionunderdroughtstress
AT weijia identificationofthelightharvestingchlorophyllabbindingproteingenefamilyinpeachprunuspersicalandtheirexpressionunderdroughtstress
AT shixingyun identificationofthelightharvestingchlorophyllabbindingproteingenefamilyinpeachprunuspersicalandtheirexpressionunderdroughtstress
AT qianweihong identificationofthelightharvestingchlorophyllabbindingproteingenefamilyinpeachprunuspersicalandtheirexpressionunderdroughtstress
AT mehmoodjan identificationofthelightharvestingchlorophyllabbindingproteingenefamilyinpeachprunuspersicalandtheirexpressionunderdroughtstress
AT yinyiming identificationofthelightharvestingchlorophyllabbindingproteingenefamilyinpeachprunuspersicalandtheirexpressionunderdroughtstress
AT jiahuijuan identificationofthelightharvestingchlorophyllabbindingproteingenefamilyinpeachprunuspersicalandtheirexpressionunderdroughtstress