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Development of a Simple Direct and Hot-Start PCR Using Escherichia coli-Expressing Taq DNA Polymerase

Taq DNA polymerases have played an important role in molecular biology for several years and are frequently used for polymerase chain reaction (PCR); hence, there is an increasing interest in developing a convenient method for preparing Taq DNA polymerase for routine use in laboratories. We develope...

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Autores principales: Lee, Sun Ju, Park, Sang-Yong, Lee, Kwang-Ho, Lee, Min-Woo, Yu, Chae-Yeon, Maeng, Jaeyoung, Kim, Hyeong-Dong, Kim, Suhng Wook
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10379934/
https://www.ncbi.nlm.nih.gov/pubmed/37511160
http://dx.doi.org/10.3390/ijms241411405
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author Lee, Sun Ju
Park, Sang-Yong
Lee, Kwang-Ho
Lee, Min-Woo
Yu, Chae-Yeon
Maeng, Jaeyoung
Kim, Hyeong-Dong
Kim, Suhng Wook
author_facet Lee, Sun Ju
Park, Sang-Yong
Lee, Kwang-Ho
Lee, Min-Woo
Yu, Chae-Yeon
Maeng, Jaeyoung
Kim, Hyeong-Dong
Kim, Suhng Wook
author_sort Lee, Sun Ju
collection PubMed
description Taq DNA polymerases have played an important role in molecular biology for several years and are frequently used for polymerase chain reaction (PCR); hence, there is an increasing interest in developing a convenient method for preparing Taq DNA polymerase for routine use in laboratories. We developed a method using Escherichia coli (E. coli) that expresses thermostable Taq DNA polymerase directly in the PCR without purification. The Taq gene was transformed into E. coli and expressed. After overnight incubation and washing, E. coli-expressing Taq DNA polymerase (EcoliTaq) was used as the DNA polymerase without purification. EcoliTaq showed activity comparable to that of commercial DNA polymerase and remained stable for 3 months. With a high-pH buffer containing 2% Tween 20 and 0.4 M trehalose, EcoliTaq facilitated direct PCR amplification from anticoagulated whole blood samples. EcoliTaq exhibited good performance in allele-specific PCR using both purified DNA and whole blood samples. Furthermore, it proved to be useful as a DNA polymerase in hot-start PCR by effectively minimizing non-specific amplification. We developed a simple and cost-effective direct and hot-start PCR method in which EcoliTaq was used directly as a PCR enzyme, thus eliminating the laborious and time-consuming steps of polymerase purification.
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spelling pubmed-103799342023-07-29 Development of a Simple Direct and Hot-Start PCR Using Escherichia coli-Expressing Taq DNA Polymerase Lee, Sun Ju Park, Sang-Yong Lee, Kwang-Ho Lee, Min-Woo Yu, Chae-Yeon Maeng, Jaeyoung Kim, Hyeong-Dong Kim, Suhng Wook Int J Mol Sci Article Taq DNA polymerases have played an important role in molecular biology for several years and are frequently used for polymerase chain reaction (PCR); hence, there is an increasing interest in developing a convenient method for preparing Taq DNA polymerase for routine use in laboratories. We developed a method using Escherichia coli (E. coli) that expresses thermostable Taq DNA polymerase directly in the PCR without purification. The Taq gene was transformed into E. coli and expressed. After overnight incubation and washing, E. coli-expressing Taq DNA polymerase (EcoliTaq) was used as the DNA polymerase without purification. EcoliTaq showed activity comparable to that of commercial DNA polymerase and remained stable for 3 months. With a high-pH buffer containing 2% Tween 20 and 0.4 M trehalose, EcoliTaq facilitated direct PCR amplification from anticoagulated whole blood samples. EcoliTaq exhibited good performance in allele-specific PCR using both purified DNA and whole blood samples. Furthermore, it proved to be useful as a DNA polymerase in hot-start PCR by effectively minimizing non-specific amplification. We developed a simple and cost-effective direct and hot-start PCR method in which EcoliTaq was used directly as a PCR enzyme, thus eliminating the laborious and time-consuming steps of polymerase purification. MDPI 2023-07-13 /pmc/articles/PMC10379934/ /pubmed/37511160 http://dx.doi.org/10.3390/ijms241411405 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Lee, Sun Ju
Park, Sang-Yong
Lee, Kwang-Ho
Lee, Min-Woo
Yu, Chae-Yeon
Maeng, Jaeyoung
Kim, Hyeong-Dong
Kim, Suhng Wook
Development of a Simple Direct and Hot-Start PCR Using Escherichia coli-Expressing Taq DNA Polymerase
title Development of a Simple Direct and Hot-Start PCR Using Escherichia coli-Expressing Taq DNA Polymerase
title_full Development of a Simple Direct and Hot-Start PCR Using Escherichia coli-Expressing Taq DNA Polymerase
title_fullStr Development of a Simple Direct and Hot-Start PCR Using Escherichia coli-Expressing Taq DNA Polymerase
title_full_unstemmed Development of a Simple Direct and Hot-Start PCR Using Escherichia coli-Expressing Taq DNA Polymerase
title_short Development of a Simple Direct and Hot-Start PCR Using Escherichia coli-Expressing Taq DNA Polymerase
title_sort development of a simple direct and hot-start pcr using escherichia coli-expressing taq dna polymerase
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10379934/
https://www.ncbi.nlm.nih.gov/pubmed/37511160
http://dx.doi.org/10.3390/ijms241411405
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