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Exploring the Potential Role of Ribosomal Proteins to Enhance Potato Resilience in the Face of Changing Climatic Conditions

Potatoes have emerged as a key non-grain crop for food security worldwide. However, the looming threat of climate change poses significant risks to this vital food source, particularly through the projected reduction in crop yields under warmer temperatures. To mitigate potential crises, the develop...

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Autores principales: Valencia-Lozano, Eliana, Herrera-Isidrón, Lisset, Flores-López, Jorge Abraham, Recoder-Meléndez, Osiel Salvador, Uribe-López, Braulio, Barraza, Aarón, Cabrera-Ponce, José Luis
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10379993/
https://www.ncbi.nlm.nih.gov/pubmed/37510367
http://dx.doi.org/10.3390/genes14071463
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author Valencia-Lozano, Eliana
Herrera-Isidrón, Lisset
Flores-López, Jorge Abraham
Recoder-Meléndez, Osiel Salvador
Uribe-López, Braulio
Barraza, Aarón
Cabrera-Ponce, José Luis
author_facet Valencia-Lozano, Eliana
Herrera-Isidrón, Lisset
Flores-López, Jorge Abraham
Recoder-Meléndez, Osiel Salvador
Uribe-López, Braulio
Barraza, Aarón
Cabrera-Ponce, José Luis
author_sort Valencia-Lozano, Eliana
collection PubMed
description Potatoes have emerged as a key non-grain crop for food security worldwide. However, the looming threat of climate change poses significant risks to this vital food source, particularly through the projected reduction in crop yields under warmer temperatures. To mitigate potential crises, the development of potato varieties through genome editing holds great promise. In this study, we performed a comprehensive transcriptomic analysis to investigate microtuber development and identified several differentially expressed genes, with a particular focus on ribosomal proteins—RPL11, RPL29, RPL40 and RPL17. Our results reveal, by protein–protein interaction (PPI) network analyses, performed with the highest confidence in the STRING database platform (v11.5), the critical involvement of these ribosomal proteins in microtuber development, and highlighted their interaction with PEBP family members as potential microtuber activators. The elucidation of the molecular biological mechanisms governing ribosomal proteins will help improve the resilience of potato crops in the face of today’s changing climatic conditions.
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spelling pubmed-103799932023-07-29 Exploring the Potential Role of Ribosomal Proteins to Enhance Potato Resilience in the Face of Changing Climatic Conditions Valencia-Lozano, Eliana Herrera-Isidrón, Lisset Flores-López, Jorge Abraham Recoder-Meléndez, Osiel Salvador Uribe-López, Braulio Barraza, Aarón Cabrera-Ponce, José Luis Genes (Basel) Article Potatoes have emerged as a key non-grain crop for food security worldwide. However, the looming threat of climate change poses significant risks to this vital food source, particularly through the projected reduction in crop yields under warmer temperatures. To mitigate potential crises, the development of potato varieties through genome editing holds great promise. In this study, we performed a comprehensive transcriptomic analysis to investigate microtuber development and identified several differentially expressed genes, with a particular focus on ribosomal proteins—RPL11, RPL29, RPL40 and RPL17. Our results reveal, by protein–protein interaction (PPI) network analyses, performed with the highest confidence in the STRING database platform (v11.5), the critical involvement of these ribosomal proteins in microtuber development, and highlighted their interaction with PEBP family members as potential microtuber activators. The elucidation of the molecular biological mechanisms governing ribosomal proteins will help improve the resilience of potato crops in the face of today’s changing climatic conditions. MDPI 2023-07-18 /pmc/articles/PMC10379993/ /pubmed/37510367 http://dx.doi.org/10.3390/genes14071463 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Valencia-Lozano, Eliana
Herrera-Isidrón, Lisset
Flores-López, Jorge Abraham
Recoder-Meléndez, Osiel Salvador
Uribe-López, Braulio
Barraza, Aarón
Cabrera-Ponce, José Luis
Exploring the Potential Role of Ribosomal Proteins to Enhance Potato Resilience in the Face of Changing Climatic Conditions
title Exploring the Potential Role of Ribosomal Proteins to Enhance Potato Resilience in the Face of Changing Climatic Conditions
title_full Exploring the Potential Role of Ribosomal Proteins to Enhance Potato Resilience in the Face of Changing Climatic Conditions
title_fullStr Exploring the Potential Role of Ribosomal Proteins to Enhance Potato Resilience in the Face of Changing Climatic Conditions
title_full_unstemmed Exploring the Potential Role of Ribosomal Proteins to Enhance Potato Resilience in the Face of Changing Climatic Conditions
title_short Exploring the Potential Role of Ribosomal Proteins to Enhance Potato Resilience in the Face of Changing Climatic Conditions
title_sort exploring the potential role of ribosomal proteins to enhance potato resilience in the face of changing climatic conditions
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10379993/
https://www.ncbi.nlm.nih.gov/pubmed/37510367
http://dx.doi.org/10.3390/genes14071463
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