Cargando…

Antioxidant Chimeric Molecules: Are Chemical Motifs Additive? The Case of a Selenium-Based Ligand

We set up an in silico experiment and designed a chimeric compound integrating molecular features from different efficient ROS (Reactive Oxygen Species) scavengers, with the purpose of investigating potential relationships between molecular structure and antioxidant activity. Furthermore, a selenium...

Descripción completa

Detalles Bibliográficos
Autores principales: Zeppilli, Davide, Aldinio-Colbachini, Anna, Ribaudo, Giovanni, Tubaro, Cristina, Dalla Tiezza, Marco, Bortoli, Marco, Zagotto, Giuseppe, Orian, Laura
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10380222/
https://www.ncbi.nlm.nih.gov/pubmed/37511560
http://dx.doi.org/10.3390/ijms241411797
_version_ 1785080134022201344
author Zeppilli, Davide
Aldinio-Colbachini, Anna
Ribaudo, Giovanni
Tubaro, Cristina
Dalla Tiezza, Marco
Bortoli, Marco
Zagotto, Giuseppe
Orian, Laura
author_facet Zeppilli, Davide
Aldinio-Colbachini, Anna
Ribaudo, Giovanni
Tubaro, Cristina
Dalla Tiezza, Marco
Bortoli, Marco
Zagotto, Giuseppe
Orian, Laura
author_sort Zeppilli, Davide
collection PubMed
description We set up an in silico experiment and designed a chimeric compound integrating molecular features from different efficient ROS (Reactive Oxygen Species) scavengers, with the purpose of investigating potential relationships between molecular structure and antioxidant activity. Furthermore, a selenium centre was inserted due to its known capacity to reduce hydroperoxides, acting as a molecular mimic of glutathione peroxidase; finally, since this organoselenide is a precursor of a N-heterocyclic carbene ligand, its Au(I) carbene complex was designed and examined. A validated protocol based on DFT (Density Functional Theory) was employed to investigate the radical scavenging activity of available sites on the organoselenide precursor ((SMD)-M06-2X/6-311+G(d,p)//M06-2X/6-31G(d)), as well as on the organometallic complex ((SMD)-M06-2X/SDD (Au), 6-311+G(d,p)//ZORA-BLYP-D3(BJ)/TZ2P), considering HAT (Hydrogen Atom Transfer) and RAF (Radical Adduct Formation) regarding five different radicals. The results of this case study suggest that the antioxidant potential of chemical motifs should not be considered as an additive property when designing a chimeric compound, but rather that the relevance of a molecular topology is derived from a chemical motif combined with an opportune chemical space of the molecule. Thus, the direct contributions of single functional groups which are generally thought of as antioxidants per se do not guarantee the efficient radical scavenging potential of a molecular species.
format Online
Article
Text
id pubmed-10380222
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-103802222023-07-29 Antioxidant Chimeric Molecules: Are Chemical Motifs Additive? The Case of a Selenium-Based Ligand Zeppilli, Davide Aldinio-Colbachini, Anna Ribaudo, Giovanni Tubaro, Cristina Dalla Tiezza, Marco Bortoli, Marco Zagotto, Giuseppe Orian, Laura Int J Mol Sci Article We set up an in silico experiment and designed a chimeric compound integrating molecular features from different efficient ROS (Reactive Oxygen Species) scavengers, with the purpose of investigating potential relationships between molecular structure and antioxidant activity. Furthermore, a selenium centre was inserted due to its known capacity to reduce hydroperoxides, acting as a molecular mimic of glutathione peroxidase; finally, since this organoselenide is a precursor of a N-heterocyclic carbene ligand, its Au(I) carbene complex was designed and examined. A validated protocol based on DFT (Density Functional Theory) was employed to investigate the radical scavenging activity of available sites on the organoselenide precursor ((SMD)-M06-2X/6-311+G(d,p)//M06-2X/6-31G(d)), as well as on the organometallic complex ((SMD)-M06-2X/SDD (Au), 6-311+G(d,p)//ZORA-BLYP-D3(BJ)/TZ2P), considering HAT (Hydrogen Atom Transfer) and RAF (Radical Adduct Formation) regarding five different radicals. The results of this case study suggest that the antioxidant potential of chemical motifs should not be considered as an additive property when designing a chimeric compound, but rather that the relevance of a molecular topology is derived from a chemical motif combined with an opportune chemical space of the molecule. Thus, the direct contributions of single functional groups which are generally thought of as antioxidants per se do not guarantee the efficient radical scavenging potential of a molecular species. MDPI 2023-07-22 /pmc/articles/PMC10380222/ /pubmed/37511560 http://dx.doi.org/10.3390/ijms241411797 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Zeppilli, Davide
Aldinio-Colbachini, Anna
Ribaudo, Giovanni
Tubaro, Cristina
Dalla Tiezza, Marco
Bortoli, Marco
Zagotto, Giuseppe
Orian, Laura
Antioxidant Chimeric Molecules: Are Chemical Motifs Additive? The Case of a Selenium-Based Ligand
title Antioxidant Chimeric Molecules: Are Chemical Motifs Additive? The Case of a Selenium-Based Ligand
title_full Antioxidant Chimeric Molecules: Are Chemical Motifs Additive? The Case of a Selenium-Based Ligand
title_fullStr Antioxidant Chimeric Molecules: Are Chemical Motifs Additive? The Case of a Selenium-Based Ligand
title_full_unstemmed Antioxidant Chimeric Molecules: Are Chemical Motifs Additive? The Case of a Selenium-Based Ligand
title_short Antioxidant Chimeric Molecules: Are Chemical Motifs Additive? The Case of a Selenium-Based Ligand
title_sort antioxidant chimeric molecules: are chemical motifs additive? the case of a selenium-based ligand
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10380222/
https://www.ncbi.nlm.nih.gov/pubmed/37511560
http://dx.doi.org/10.3390/ijms241411797
work_keys_str_mv AT zeppillidavide antioxidantchimericmoleculesarechemicalmotifsadditivethecaseofaseleniumbasedligand
AT aldiniocolbachinianna antioxidantchimericmoleculesarechemicalmotifsadditivethecaseofaseleniumbasedligand
AT ribaudogiovanni antioxidantchimericmoleculesarechemicalmotifsadditivethecaseofaseleniumbasedligand
AT tubarocristina antioxidantchimericmoleculesarechemicalmotifsadditivethecaseofaseleniumbasedligand
AT dallatiezzamarco antioxidantchimericmoleculesarechemicalmotifsadditivethecaseofaseleniumbasedligand
AT bortolimarco antioxidantchimericmoleculesarechemicalmotifsadditivethecaseofaseleniumbasedligand
AT zagottogiuseppe antioxidantchimericmoleculesarechemicalmotifsadditivethecaseofaseleniumbasedligand
AT orianlaura antioxidantchimericmoleculesarechemicalmotifsadditivethecaseofaseleniumbasedligand