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Development and Validation of Risk Prediction Models for Colorectal Cancer in Patients with Symptoms

We aimed to develop and validate prediction models incorporating demographics, clinical features, and a weighted genetic risk score (wGRS) for individual prediction of colorectal cancer (CRC) risk in patients with gastroenterological symptoms. Prediction models were developed with internal validatio...

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Autores principales: Xu, Wei, Mesa-Eguiagaray, Ines, Kirkpatrick, Theresa, Devlin, Jennifer, Brogan, Stephanie, Turner, Patricia, Macdonald, Chloe, Thornton, Michelle, Zhang, Xiaomeng, He, Yazhou, Li, Xue, Timofeeva, Maria, Farrington, Susan, Din, Farhat, Dunlop, Malcolm, Theodoratou, Evropi
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10381199/
https://www.ncbi.nlm.nih.gov/pubmed/37511678
http://dx.doi.org/10.3390/jpm13071065
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author Xu, Wei
Mesa-Eguiagaray, Ines
Kirkpatrick, Theresa
Devlin, Jennifer
Brogan, Stephanie
Turner, Patricia
Macdonald, Chloe
Thornton, Michelle
Zhang, Xiaomeng
He, Yazhou
Li, Xue
Timofeeva, Maria
Farrington, Susan
Din, Farhat
Dunlop, Malcolm
Theodoratou, Evropi
author_facet Xu, Wei
Mesa-Eguiagaray, Ines
Kirkpatrick, Theresa
Devlin, Jennifer
Brogan, Stephanie
Turner, Patricia
Macdonald, Chloe
Thornton, Michelle
Zhang, Xiaomeng
He, Yazhou
Li, Xue
Timofeeva, Maria
Farrington, Susan
Din, Farhat
Dunlop, Malcolm
Theodoratou, Evropi
author_sort Xu, Wei
collection PubMed
description We aimed to develop and validate prediction models incorporating demographics, clinical features, and a weighted genetic risk score (wGRS) for individual prediction of colorectal cancer (CRC) risk in patients with gastroenterological symptoms. Prediction models were developed with internal validation [CRC Cases: n = 1686/Controls: n = 963]. Candidate predictors included age, sex, BMI, wGRS, family history, and symptoms (changes in bowel habits, rectal bleeding, weight loss, anaemia, abdominal pain). The baseline model included all the non-genetic predictors. Models A (baseline model + wGRS) and B (baseline model) were developed based on LASSO regression to select predictors. Models C (baseline model + wGRS) and D (baseline model) were built using all variables. Models’ calibration and discrimination were evaluated through the Hosmer-Lemeshow test (calibration curves were plotted) and C-statistics (corrected based on 1000 bootstrapping). The models’ prediction performance was: model A (corrected C-statistic = 0.765); model B (corrected C-statistic = 0.753); model C (corrected C-statistic = 0.764); and model D (corrected C-statistic = 0.752). Models A and C, that integrated wGRS with demographic and clinical predictors, had a statistically significant improved prediction performance. Our findings suggest that future application of genetic predictors holds significant promise, which could enhance CRC risk prediction. Therefore, further investigation through model external validation and clinical impact is merited.
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spelling pubmed-103811992023-07-29 Development and Validation of Risk Prediction Models for Colorectal Cancer in Patients with Symptoms Xu, Wei Mesa-Eguiagaray, Ines Kirkpatrick, Theresa Devlin, Jennifer Brogan, Stephanie Turner, Patricia Macdonald, Chloe Thornton, Michelle Zhang, Xiaomeng He, Yazhou Li, Xue Timofeeva, Maria Farrington, Susan Din, Farhat Dunlop, Malcolm Theodoratou, Evropi J Pers Med Article We aimed to develop and validate prediction models incorporating demographics, clinical features, and a weighted genetic risk score (wGRS) for individual prediction of colorectal cancer (CRC) risk in patients with gastroenterological symptoms. Prediction models were developed with internal validation [CRC Cases: n = 1686/Controls: n = 963]. Candidate predictors included age, sex, BMI, wGRS, family history, and symptoms (changes in bowel habits, rectal bleeding, weight loss, anaemia, abdominal pain). The baseline model included all the non-genetic predictors. Models A (baseline model + wGRS) and B (baseline model) were developed based on LASSO regression to select predictors. Models C (baseline model + wGRS) and D (baseline model) were built using all variables. Models’ calibration and discrimination were evaluated through the Hosmer-Lemeshow test (calibration curves were plotted) and C-statistics (corrected based on 1000 bootstrapping). The models’ prediction performance was: model A (corrected C-statistic = 0.765); model B (corrected C-statistic = 0.753); model C (corrected C-statistic = 0.764); and model D (corrected C-statistic = 0.752). Models A and C, that integrated wGRS with demographic and clinical predictors, had a statistically significant improved prediction performance. Our findings suggest that future application of genetic predictors holds significant promise, which could enhance CRC risk prediction. Therefore, further investigation through model external validation and clinical impact is merited. MDPI 2023-06-29 /pmc/articles/PMC10381199/ /pubmed/37511678 http://dx.doi.org/10.3390/jpm13071065 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Xu, Wei
Mesa-Eguiagaray, Ines
Kirkpatrick, Theresa
Devlin, Jennifer
Brogan, Stephanie
Turner, Patricia
Macdonald, Chloe
Thornton, Michelle
Zhang, Xiaomeng
He, Yazhou
Li, Xue
Timofeeva, Maria
Farrington, Susan
Din, Farhat
Dunlop, Malcolm
Theodoratou, Evropi
Development and Validation of Risk Prediction Models for Colorectal Cancer in Patients with Symptoms
title Development and Validation of Risk Prediction Models for Colorectal Cancer in Patients with Symptoms
title_full Development and Validation of Risk Prediction Models for Colorectal Cancer in Patients with Symptoms
title_fullStr Development and Validation of Risk Prediction Models for Colorectal Cancer in Patients with Symptoms
title_full_unstemmed Development and Validation of Risk Prediction Models for Colorectal Cancer in Patients with Symptoms
title_short Development and Validation of Risk Prediction Models for Colorectal Cancer in Patients with Symptoms
title_sort development and validation of risk prediction models for colorectal cancer in patients with symptoms
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10381199/
https://www.ncbi.nlm.nih.gov/pubmed/37511678
http://dx.doi.org/10.3390/jpm13071065
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