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Development and Validation of Risk Prediction Models for Colorectal Cancer in Patients with Symptoms
We aimed to develop and validate prediction models incorporating demographics, clinical features, and a weighted genetic risk score (wGRS) for individual prediction of colorectal cancer (CRC) risk in patients with gastroenterological symptoms. Prediction models were developed with internal validatio...
Autores principales: | , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10381199/ https://www.ncbi.nlm.nih.gov/pubmed/37511678 http://dx.doi.org/10.3390/jpm13071065 |
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author | Xu, Wei Mesa-Eguiagaray, Ines Kirkpatrick, Theresa Devlin, Jennifer Brogan, Stephanie Turner, Patricia Macdonald, Chloe Thornton, Michelle Zhang, Xiaomeng He, Yazhou Li, Xue Timofeeva, Maria Farrington, Susan Din, Farhat Dunlop, Malcolm Theodoratou, Evropi |
author_facet | Xu, Wei Mesa-Eguiagaray, Ines Kirkpatrick, Theresa Devlin, Jennifer Brogan, Stephanie Turner, Patricia Macdonald, Chloe Thornton, Michelle Zhang, Xiaomeng He, Yazhou Li, Xue Timofeeva, Maria Farrington, Susan Din, Farhat Dunlop, Malcolm Theodoratou, Evropi |
author_sort | Xu, Wei |
collection | PubMed |
description | We aimed to develop and validate prediction models incorporating demographics, clinical features, and a weighted genetic risk score (wGRS) for individual prediction of colorectal cancer (CRC) risk in patients with gastroenterological symptoms. Prediction models were developed with internal validation [CRC Cases: n = 1686/Controls: n = 963]. Candidate predictors included age, sex, BMI, wGRS, family history, and symptoms (changes in bowel habits, rectal bleeding, weight loss, anaemia, abdominal pain). The baseline model included all the non-genetic predictors. Models A (baseline model + wGRS) and B (baseline model) were developed based on LASSO regression to select predictors. Models C (baseline model + wGRS) and D (baseline model) were built using all variables. Models’ calibration and discrimination were evaluated through the Hosmer-Lemeshow test (calibration curves were plotted) and C-statistics (corrected based on 1000 bootstrapping). The models’ prediction performance was: model A (corrected C-statistic = 0.765); model B (corrected C-statistic = 0.753); model C (corrected C-statistic = 0.764); and model D (corrected C-statistic = 0.752). Models A and C, that integrated wGRS with demographic and clinical predictors, had a statistically significant improved prediction performance. Our findings suggest that future application of genetic predictors holds significant promise, which could enhance CRC risk prediction. Therefore, further investigation through model external validation and clinical impact is merited. |
format | Online Article Text |
id | pubmed-10381199 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-103811992023-07-29 Development and Validation of Risk Prediction Models for Colorectal Cancer in Patients with Symptoms Xu, Wei Mesa-Eguiagaray, Ines Kirkpatrick, Theresa Devlin, Jennifer Brogan, Stephanie Turner, Patricia Macdonald, Chloe Thornton, Michelle Zhang, Xiaomeng He, Yazhou Li, Xue Timofeeva, Maria Farrington, Susan Din, Farhat Dunlop, Malcolm Theodoratou, Evropi J Pers Med Article We aimed to develop and validate prediction models incorporating demographics, clinical features, and a weighted genetic risk score (wGRS) for individual prediction of colorectal cancer (CRC) risk in patients with gastroenterological symptoms. Prediction models were developed with internal validation [CRC Cases: n = 1686/Controls: n = 963]. Candidate predictors included age, sex, BMI, wGRS, family history, and symptoms (changes in bowel habits, rectal bleeding, weight loss, anaemia, abdominal pain). The baseline model included all the non-genetic predictors. Models A (baseline model + wGRS) and B (baseline model) were developed based on LASSO regression to select predictors. Models C (baseline model + wGRS) and D (baseline model) were built using all variables. Models’ calibration and discrimination were evaluated through the Hosmer-Lemeshow test (calibration curves were plotted) and C-statistics (corrected based on 1000 bootstrapping). The models’ prediction performance was: model A (corrected C-statistic = 0.765); model B (corrected C-statistic = 0.753); model C (corrected C-statistic = 0.764); and model D (corrected C-statistic = 0.752). Models A and C, that integrated wGRS with demographic and clinical predictors, had a statistically significant improved prediction performance. Our findings suggest that future application of genetic predictors holds significant promise, which could enhance CRC risk prediction. Therefore, further investigation through model external validation and clinical impact is merited. MDPI 2023-06-29 /pmc/articles/PMC10381199/ /pubmed/37511678 http://dx.doi.org/10.3390/jpm13071065 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Xu, Wei Mesa-Eguiagaray, Ines Kirkpatrick, Theresa Devlin, Jennifer Brogan, Stephanie Turner, Patricia Macdonald, Chloe Thornton, Michelle Zhang, Xiaomeng He, Yazhou Li, Xue Timofeeva, Maria Farrington, Susan Din, Farhat Dunlop, Malcolm Theodoratou, Evropi Development and Validation of Risk Prediction Models for Colorectal Cancer in Patients with Symptoms |
title | Development and Validation of Risk Prediction Models for Colorectal Cancer in Patients with Symptoms |
title_full | Development and Validation of Risk Prediction Models for Colorectal Cancer in Patients with Symptoms |
title_fullStr | Development and Validation of Risk Prediction Models for Colorectal Cancer in Patients with Symptoms |
title_full_unstemmed | Development and Validation of Risk Prediction Models for Colorectal Cancer in Patients with Symptoms |
title_short | Development and Validation of Risk Prediction Models for Colorectal Cancer in Patients with Symptoms |
title_sort | development and validation of risk prediction models for colorectal cancer in patients with symptoms |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10381199/ https://www.ncbi.nlm.nih.gov/pubmed/37511678 http://dx.doi.org/10.3390/jpm13071065 |
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