Cargando…
Host Range and Loop-Mediated Isothermal Amplification Detection of Globisporangium sylvaticum from Guizhou, China
Globisporangium, especially G. sylvaticum, causes devastating root rot, blight, and other diseases in various species of cash crops. To investigate the distribution and host range of G. sylvaticum in Guizhou, a suitable habitat for this pathogen, we collected 156 root-diseased samples, isolated the...
Autores principales: | , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10381608/ https://www.ncbi.nlm.nih.gov/pubmed/37504740 http://dx.doi.org/10.3390/jof9070752 |
_version_ | 1785080486048038912 |
---|---|
author | Zhang, Jing Sun, Xiaonan Ao, Ningjing Zou, Huayan Shao, Huijuan Kageyama, Koji Feng, Wenzhuo |
author_facet | Zhang, Jing Sun, Xiaonan Ao, Ningjing Zou, Huayan Shao, Huijuan Kageyama, Koji Feng, Wenzhuo |
author_sort | Zhang, Jing |
collection | PubMed |
description | Globisporangium, especially G. sylvaticum, causes devastating root rot, blight, and other diseases in various species of cash crops. To investigate the distribution and host range of G. sylvaticum in Guizhou, a suitable habitat for this pathogen, we collected 156 root-diseased samples, isolated the pathogens, and found that G. sylvaticum is widespread and has eleven host plants, including four novel hosts. Furthermore, to effectively identify G. sylvaticum, we developed a simple and dependable method based on loop-mediated isothermal amplification (LAMP), which used a primer set designed from the internal transcribed spacer sequences with high specificity and sensitivity of 1 pg/μL. Additionally, to perform field identification, we used the “Plant-LAMP” method with crude DNA extraction to detect the pathogen in 45 root samples from nine species of plants. Our results showed that this method could effectively detect G. sylvaticum in diseased roots. Therefore, our findings not only enrich existing research on the diversity of pathogenic Globisporangium in Guizhou but also present an efficient LAMP field detection method that could significantly contribute to plant disease management and prevention. |
format | Online Article Text |
id | pubmed-10381608 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-103816082023-07-29 Host Range and Loop-Mediated Isothermal Amplification Detection of Globisporangium sylvaticum from Guizhou, China Zhang, Jing Sun, Xiaonan Ao, Ningjing Zou, Huayan Shao, Huijuan Kageyama, Koji Feng, Wenzhuo J Fungi (Basel) Article Globisporangium, especially G. sylvaticum, causes devastating root rot, blight, and other diseases in various species of cash crops. To investigate the distribution and host range of G. sylvaticum in Guizhou, a suitable habitat for this pathogen, we collected 156 root-diseased samples, isolated the pathogens, and found that G. sylvaticum is widespread and has eleven host plants, including four novel hosts. Furthermore, to effectively identify G. sylvaticum, we developed a simple and dependable method based on loop-mediated isothermal amplification (LAMP), which used a primer set designed from the internal transcribed spacer sequences with high specificity and sensitivity of 1 pg/μL. Additionally, to perform field identification, we used the “Plant-LAMP” method with crude DNA extraction to detect the pathogen in 45 root samples from nine species of plants. Our results showed that this method could effectively detect G. sylvaticum in diseased roots. Therefore, our findings not only enrich existing research on the diversity of pathogenic Globisporangium in Guizhou but also present an efficient LAMP field detection method that could significantly contribute to plant disease management and prevention. MDPI 2023-07-15 /pmc/articles/PMC10381608/ /pubmed/37504740 http://dx.doi.org/10.3390/jof9070752 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Zhang, Jing Sun, Xiaonan Ao, Ningjing Zou, Huayan Shao, Huijuan Kageyama, Koji Feng, Wenzhuo Host Range and Loop-Mediated Isothermal Amplification Detection of Globisporangium sylvaticum from Guizhou, China |
title | Host Range and Loop-Mediated Isothermal Amplification Detection of Globisporangium sylvaticum from Guizhou, China |
title_full | Host Range and Loop-Mediated Isothermal Amplification Detection of Globisporangium sylvaticum from Guizhou, China |
title_fullStr | Host Range and Loop-Mediated Isothermal Amplification Detection of Globisporangium sylvaticum from Guizhou, China |
title_full_unstemmed | Host Range and Loop-Mediated Isothermal Amplification Detection of Globisporangium sylvaticum from Guizhou, China |
title_short | Host Range and Loop-Mediated Isothermal Amplification Detection of Globisporangium sylvaticum from Guizhou, China |
title_sort | host range and loop-mediated isothermal amplification detection of globisporangium sylvaticum from guizhou, china |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10381608/ https://www.ncbi.nlm.nih.gov/pubmed/37504740 http://dx.doi.org/10.3390/jof9070752 |
work_keys_str_mv | AT zhangjing hostrangeandloopmediatedisothermalamplificationdetectionofglobisporangiumsylvaticumfromguizhouchina AT sunxiaonan hostrangeandloopmediatedisothermalamplificationdetectionofglobisporangiumsylvaticumfromguizhouchina AT aoningjing hostrangeandloopmediatedisothermalamplificationdetectionofglobisporangiumsylvaticumfromguizhouchina AT zouhuayan hostrangeandloopmediatedisothermalamplificationdetectionofglobisporangiumsylvaticumfromguizhouchina AT shaohuijuan hostrangeandloopmediatedisothermalamplificationdetectionofglobisporangiumsylvaticumfromguizhouchina AT kageyamakoji hostrangeandloopmediatedisothermalamplificationdetectionofglobisporangiumsylvaticumfromguizhouchina AT fengwenzhuo hostrangeandloopmediatedisothermalamplificationdetectionofglobisporangiumsylvaticumfromguizhouchina |