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Host Range and Loop-Mediated Isothermal Amplification Detection of Globisporangium sylvaticum from Guizhou, China

Globisporangium, especially G. sylvaticum, causes devastating root rot, blight, and other diseases in various species of cash crops. To investigate the distribution and host range of G. sylvaticum in Guizhou, a suitable habitat for this pathogen, we collected 156 root-diseased samples, isolated the...

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Autores principales: Zhang, Jing, Sun, Xiaonan, Ao, Ningjing, Zou, Huayan, Shao, Huijuan, Kageyama, Koji, Feng, Wenzhuo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10381608/
https://www.ncbi.nlm.nih.gov/pubmed/37504740
http://dx.doi.org/10.3390/jof9070752
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author Zhang, Jing
Sun, Xiaonan
Ao, Ningjing
Zou, Huayan
Shao, Huijuan
Kageyama, Koji
Feng, Wenzhuo
author_facet Zhang, Jing
Sun, Xiaonan
Ao, Ningjing
Zou, Huayan
Shao, Huijuan
Kageyama, Koji
Feng, Wenzhuo
author_sort Zhang, Jing
collection PubMed
description Globisporangium, especially G. sylvaticum, causes devastating root rot, blight, and other diseases in various species of cash crops. To investigate the distribution and host range of G. sylvaticum in Guizhou, a suitable habitat for this pathogen, we collected 156 root-diseased samples, isolated the pathogens, and found that G. sylvaticum is widespread and has eleven host plants, including four novel hosts. Furthermore, to effectively identify G. sylvaticum, we developed a simple and dependable method based on loop-mediated isothermal amplification (LAMP), which used a primer set designed from the internal transcribed spacer sequences with high specificity and sensitivity of 1 pg/μL. Additionally, to perform field identification, we used the “Plant-LAMP” method with crude DNA extraction to detect the pathogen in 45 root samples from nine species of plants. Our results showed that this method could effectively detect G. sylvaticum in diseased roots. Therefore, our findings not only enrich existing research on the diversity of pathogenic Globisporangium in Guizhou but also present an efficient LAMP field detection method that could significantly contribute to plant disease management and prevention.
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spelling pubmed-103816082023-07-29 Host Range and Loop-Mediated Isothermal Amplification Detection of Globisporangium sylvaticum from Guizhou, China Zhang, Jing Sun, Xiaonan Ao, Ningjing Zou, Huayan Shao, Huijuan Kageyama, Koji Feng, Wenzhuo J Fungi (Basel) Article Globisporangium, especially G. sylvaticum, causes devastating root rot, blight, and other diseases in various species of cash crops. To investigate the distribution and host range of G. sylvaticum in Guizhou, a suitable habitat for this pathogen, we collected 156 root-diseased samples, isolated the pathogens, and found that G. sylvaticum is widespread and has eleven host plants, including four novel hosts. Furthermore, to effectively identify G. sylvaticum, we developed a simple and dependable method based on loop-mediated isothermal amplification (LAMP), which used a primer set designed from the internal transcribed spacer sequences with high specificity and sensitivity of 1 pg/μL. Additionally, to perform field identification, we used the “Plant-LAMP” method with crude DNA extraction to detect the pathogen in 45 root samples from nine species of plants. Our results showed that this method could effectively detect G. sylvaticum in diseased roots. Therefore, our findings not only enrich existing research on the diversity of pathogenic Globisporangium in Guizhou but also present an efficient LAMP field detection method that could significantly contribute to plant disease management and prevention. MDPI 2023-07-15 /pmc/articles/PMC10381608/ /pubmed/37504740 http://dx.doi.org/10.3390/jof9070752 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Zhang, Jing
Sun, Xiaonan
Ao, Ningjing
Zou, Huayan
Shao, Huijuan
Kageyama, Koji
Feng, Wenzhuo
Host Range and Loop-Mediated Isothermal Amplification Detection of Globisporangium sylvaticum from Guizhou, China
title Host Range and Loop-Mediated Isothermal Amplification Detection of Globisporangium sylvaticum from Guizhou, China
title_full Host Range and Loop-Mediated Isothermal Amplification Detection of Globisporangium sylvaticum from Guizhou, China
title_fullStr Host Range and Loop-Mediated Isothermal Amplification Detection of Globisporangium sylvaticum from Guizhou, China
title_full_unstemmed Host Range and Loop-Mediated Isothermal Amplification Detection of Globisporangium sylvaticum from Guizhou, China
title_short Host Range and Loop-Mediated Isothermal Amplification Detection of Globisporangium sylvaticum from Guizhou, China
title_sort host range and loop-mediated isothermal amplification detection of globisporangium sylvaticum from guizhou, china
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10381608/
https://www.ncbi.nlm.nih.gov/pubmed/37504740
http://dx.doi.org/10.3390/jof9070752
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