Cargando…

Identification of disulfidptosis-related genes with immune infiltration in hepatocellular carcinoma

Hepatocellular carcinoma (HCC) is a common malignant primary tumor that is usually diagnosed at an advanced stage; thus, there is an urgent need for efficient and sensitive novel diagnostic markers to determine the prognosis and halt disease progression in patients with HCC. Disulfidptosis is a rece...

Descripción completa

Detalles Bibliográficos
Autores principales: Li, Xiao-min, Liu, Shan-peng, Li, Yu, Cai, Xiao-ming, Zhang, Shao-bo, Xie, Ze-feng
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10382636/
https://www.ncbi.nlm.nih.gov/pubmed/37520990
http://dx.doi.org/10.1016/j.heliyon.2023.e18436
_version_ 1785080715360075776
author Li, Xiao-min
Liu, Shan-peng
Li, Yu
Cai, Xiao-ming
Zhang, Shao-bo
Xie, Ze-feng
author_facet Li, Xiao-min
Liu, Shan-peng
Li, Yu
Cai, Xiao-ming
Zhang, Shao-bo
Xie, Ze-feng
author_sort Li, Xiao-min
collection PubMed
description Hepatocellular carcinoma (HCC) is a common malignant primary tumor that is usually diagnosed at an advanced stage; thus, there is an urgent need for efficient and sensitive novel diagnostic markers to determine the prognosis and halt disease progression in patients with HCC. Disulfidptosis is a recently discovered form of programmed cell death, essentially an abnormal accumulation of intracellular bisulfides. Therefore, our study aimed to investigate the role of disulfidptosis-related genes (DRGs) in the pathogenesis of HCC. Based on public databases, our work demonstrates the relationship between DRG and expression, immunity, mutation/drug sensitivity, and functional enrichment in HCC. We also revealed the significant heterogeneity of HCC in different DRGs sub-clusters and in differentially expressed genes (DEGs), respectively. Subsequently, the most relevant candidate gene, SLC7A11, was screened by machine learning to further validate the significance of SLC7A11 in the clinical features, prognosis, nomogram pattern, and immune infiltration of HCC. Our study, which elucidates the potential mechanisms of DRGs and HCC, reveals that SLC7A11 can serve as a novel prognostic biomarker and provides opportunities and challenges for individualized cancer immunotherapy strategies.
format Online
Article
Text
id pubmed-10382636
institution National Center for Biotechnology Information
language English
publishDate 2023
publisher Elsevier
record_format MEDLINE/PubMed
spelling pubmed-103826362023-07-30 Identification of disulfidptosis-related genes with immune infiltration in hepatocellular carcinoma Li, Xiao-min Liu, Shan-peng Li, Yu Cai, Xiao-ming Zhang, Shao-bo Xie, Ze-feng Heliyon Research Article Hepatocellular carcinoma (HCC) is a common malignant primary tumor that is usually diagnosed at an advanced stage; thus, there is an urgent need for efficient and sensitive novel diagnostic markers to determine the prognosis and halt disease progression in patients with HCC. Disulfidptosis is a recently discovered form of programmed cell death, essentially an abnormal accumulation of intracellular bisulfides. Therefore, our study aimed to investigate the role of disulfidptosis-related genes (DRGs) in the pathogenesis of HCC. Based on public databases, our work demonstrates the relationship between DRG and expression, immunity, mutation/drug sensitivity, and functional enrichment in HCC. We also revealed the significant heterogeneity of HCC in different DRGs sub-clusters and in differentially expressed genes (DEGs), respectively. Subsequently, the most relevant candidate gene, SLC7A11, was screened by machine learning to further validate the significance of SLC7A11 in the clinical features, prognosis, nomogram pattern, and immune infiltration of HCC. Our study, which elucidates the potential mechanisms of DRGs and HCC, reveals that SLC7A11 can serve as a novel prognostic biomarker and provides opportunities and challenges for individualized cancer immunotherapy strategies. Elsevier 2023-07-20 /pmc/articles/PMC10382636/ /pubmed/37520990 http://dx.doi.org/10.1016/j.heliyon.2023.e18436 Text en © 2023 The Authors. Published by Elsevier Ltd. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Research Article
Li, Xiao-min
Liu, Shan-peng
Li, Yu
Cai, Xiao-ming
Zhang, Shao-bo
Xie, Ze-feng
Identification of disulfidptosis-related genes with immune infiltration in hepatocellular carcinoma
title Identification of disulfidptosis-related genes with immune infiltration in hepatocellular carcinoma
title_full Identification of disulfidptosis-related genes with immune infiltration in hepatocellular carcinoma
title_fullStr Identification of disulfidptosis-related genes with immune infiltration in hepatocellular carcinoma
title_full_unstemmed Identification of disulfidptosis-related genes with immune infiltration in hepatocellular carcinoma
title_short Identification of disulfidptosis-related genes with immune infiltration in hepatocellular carcinoma
title_sort identification of disulfidptosis-related genes with immune infiltration in hepatocellular carcinoma
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10382636/
https://www.ncbi.nlm.nih.gov/pubmed/37520990
http://dx.doi.org/10.1016/j.heliyon.2023.e18436
work_keys_str_mv AT lixiaomin identificationofdisulfidptosisrelatedgeneswithimmuneinfiltrationinhepatocellularcarcinoma
AT liushanpeng identificationofdisulfidptosisrelatedgeneswithimmuneinfiltrationinhepatocellularcarcinoma
AT liyu identificationofdisulfidptosisrelatedgeneswithimmuneinfiltrationinhepatocellularcarcinoma
AT caixiaoming identificationofdisulfidptosisrelatedgeneswithimmuneinfiltrationinhepatocellularcarcinoma
AT zhangshaobo identificationofdisulfidptosisrelatedgeneswithimmuneinfiltrationinhepatocellularcarcinoma
AT xiezefeng identificationofdisulfidptosisrelatedgeneswithimmuneinfiltrationinhepatocellularcarcinoma