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A Mass Spectrometry Database for Sea Cucumber Triterpene Glycosides

Sea cucumber triterpene glycosides are a class of secondary metabolites that possess distinctive chemical structures and exhibit a variety of biological and pharmacological activities. The application of MS-based approaches for the study of triterpene glycosides allows rapid evaluation of the struct...

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Autores principales: Popov, Roman S., Ivanchina, Natalia V., Silchenko, Alexandra S., Avilov, Sergey A., Kalinin, Vladimir I., Malyarenko, Timofey V., Stonik, Valentin A., Dmitrenok, Pavel S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10384350/
https://www.ncbi.nlm.nih.gov/pubmed/37512490
http://dx.doi.org/10.3390/metabo13070783
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author Popov, Roman S.
Ivanchina, Natalia V.
Silchenko, Alexandra S.
Avilov, Sergey A.
Kalinin, Vladimir I.
Malyarenko, Timofey V.
Stonik, Valentin A.
Dmitrenok, Pavel S.
author_facet Popov, Roman S.
Ivanchina, Natalia V.
Silchenko, Alexandra S.
Avilov, Sergey A.
Kalinin, Vladimir I.
Malyarenko, Timofey V.
Stonik, Valentin A.
Dmitrenok, Pavel S.
author_sort Popov, Roman S.
collection PubMed
description Sea cucumber triterpene glycosides are a class of secondary metabolites that possess distinctive chemical structures and exhibit a variety of biological and pharmacological activities. The application of MS-based approaches for the study of triterpene glycosides allows rapid evaluation of the structural diversity of metabolites in complex mixtures. However, the identification of the detected triterpene glycosides can be challenging. The objective of this study is to establish the first spectral library containing the mass spectra of sea cucumber triterpene glycosides using ultraperformance liquid chromatography-quadrupole time-of-flight mass spectrometry. The library contains the electrospray ionization tandem mass spectra and retention times of 191 triterpene glycosides previously isolated from 15 sea cucumber species and one starfish at the Laboratory of the Chemistry of Marine Natural Products of the G.B. Elyakov Pacific Institute of Bioorganic Chemistry. In addition, the chromatographic behavior and some structure-related neutral losses in tandem MS are discussed. The obtained data will accelerate the accurate dereplication of known triterpene glycosides and the annotation of novel compounds, as we demonstrated by the processing of LC-MS/MS data of Eupentacta fraudatrix extract.
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spelling pubmed-103843502023-07-30 A Mass Spectrometry Database for Sea Cucumber Triterpene Glycosides Popov, Roman S. Ivanchina, Natalia V. Silchenko, Alexandra S. Avilov, Sergey A. Kalinin, Vladimir I. Malyarenko, Timofey V. Stonik, Valentin A. Dmitrenok, Pavel S. Metabolites Article Sea cucumber triterpene glycosides are a class of secondary metabolites that possess distinctive chemical structures and exhibit a variety of biological and pharmacological activities. The application of MS-based approaches for the study of triterpene glycosides allows rapid evaluation of the structural diversity of metabolites in complex mixtures. However, the identification of the detected triterpene glycosides can be challenging. The objective of this study is to establish the first spectral library containing the mass spectra of sea cucumber triterpene glycosides using ultraperformance liquid chromatography-quadrupole time-of-flight mass spectrometry. The library contains the electrospray ionization tandem mass spectra and retention times of 191 triterpene glycosides previously isolated from 15 sea cucumber species and one starfish at the Laboratory of the Chemistry of Marine Natural Products of the G.B. Elyakov Pacific Institute of Bioorganic Chemistry. In addition, the chromatographic behavior and some structure-related neutral losses in tandem MS are discussed. The obtained data will accelerate the accurate dereplication of known triterpene glycosides and the annotation of novel compounds, as we demonstrated by the processing of LC-MS/MS data of Eupentacta fraudatrix extract. MDPI 2023-06-23 /pmc/articles/PMC10384350/ /pubmed/37512490 http://dx.doi.org/10.3390/metabo13070783 Text en © 2023 by the authors. https://creativecommons.org/licenses/by/4.0/Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Popov, Roman S.
Ivanchina, Natalia V.
Silchenko, Alexandra S.
Avilov, Sergey A.
Kalinin, Vladimir I.
Malyarenko, Timofey V.
Stonik, Valentin A.
Dmitrenok, Pavel S.
A Mass Spectrometry Database for Sea Cucumber Triterpene Glycosides
title A Mass Spectrometry Database for Sea Cucumber Triterpene Glycosides
title_full A Mass Spectrometry Database for Sea Cucumber Triterpene Glycosides
title_fullStr A Mass Spectrometry Database for Sea Cucumber Triterpene Glycosides
title_full_unstemmed A Mass Spectrometry Database for Sea Cucumber Triterpene Glycosides
title_short A Mass Spectrometry Database for Sea Cucumber Triterpene Glycosides
title_sort mass spectrometry database for sea cucumber triterpene glycosides
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10384350/
https://www.ncbi.nlm.nih.gov/pubmed/37512490
http://dx.doi.org/10.3390/metabo13070783
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