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Cell-type-specific population dynamics of diverse reward computations
Computational analysis of cellular activity has developed largely independently of modern transcriptomic cell typology, but integrating these approaches may be essential for full insight into cellular-level mechanisms underlying brain function and dysfunction. Applying this approach to the habenula...
Autores principales: | , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
2022
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10387374/ https://www.ncbi.nlm.nih.gov/pubmed/36113428 http://dx.doi.org/10.1016/j.cell.2022.08.019 |
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author | Sylwestrak, Emily L. Jo, YoungJu Vesuna, Sam Wang, Xiao Holcomb, Blake Tien, Rebecca H. Kim, Doo Kyung Fenno, Lief Ramakrishnan, Charu Allen, William E. Chen, Ritchie Shenoy, Krishna V. Sussillo, David Deisseroth, Karl |
author_facet | Sylwestrak, Emily L. Jo, YoungJu Vesuna, Sam Wang, Xiao Holcomb, Blake Tien, Rebecca H. Kim, Doo Kyung Fenno, Lief Ramakrishnan, Charu Allen, William E. Chen, Ritchie Shenoy, Krishna V. Sussillo, David Deisseroth, Karl |
author_sort | Sylwestrak, Emily L. |
collection | PubMed |
description | Computational analysis of cellular activity has developed largely independently of modern transcriptomic cell typology, but integrating these approaches may be essential for full insight into cellular-level mechanisms underlying brain function and dysfunction. Applying this approach to the habenula (a structure with diverse, intermingled molecular, anatomical, and computational features), we identified encoding of reward-predictive cues and reward outcomes in distinct genetically defined neural populations, including TH(+) cells and Tac1(+) cells. Data from genetically targeted recordings were used to train an optimized nonlinear dynamical systems model and revealed activity dynamics consistent with a line attractor. High-density, cell-type-specific electrophysiological recordings and optogenetic perturbation provided supporting evidence for this model. Reverse-engineering predicted how Tac1(+) cells might integrate reward history, which was complemented by in vivo experimentation. This integrated approach describes a process by which data-driven computational models of population activity can generate and frame actionable hypotheses for cell-type-specific investigation in biological systems. |
format | Online Article Text |
id | pubmed-10387374 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2022 |
record_format | MEDLINE/PubMed |
spelling | pubmed-103873742023-07-30 Cell-type-specific population dynamics of diverse reward computations Sylwestrak, Emily L. Jo, YoungJu Vesuna, Sam Wang, Xiao Holcomb, Blake Tien, Rebecca H. Kim, Doo Kyung Fenno, Lief Ramakrishnan, Charu Allen, William E. Chen, Ritchie Shenoy, Krishna V. Sussillo, David Deisseroth, Karl Cell Article Computational analysis of cellular activity has developed largely independently of modern transcriptomic cell typology, but integrating these approaches may be essential for full insight into cellular-level mechanisms underlying brain function and dysfunction. Applying this approach to the habenula (a structure with diverse, intermingled molecular, anatomical, and computational features), we identified encoding of reward-predictive cues and reward outcomes in distinct genetically defined neural populations, including TH(+) cells and Tac1(+) cells. Data from genetically targeted recordings were used to train an optimized nonlinear dynamical systems model and revealed activity dynamics consistent with a line attractor. High-density, cell-type-specific electrophysiological recordings and optogenetic perturbation provided supporting evidence for this model. Reverse-engineering predicted how Tac1(+) cells might integrate reward history, which was complemented by in vivo experimentation. This integrated approach describes a process by which data-driven computational models of population activity can generate and frame actionable hypotheses for cell-type-specific investigation in biological systems. 2022-09-15 /pmc/articles/PMC10387374/ /pubmed/36113428 http://dx.doi.org/10.1016/j.cell.2022.08.019 Text en https://creativecommons.org/licenses/by/4.0/This work is licensed under a Creative Commons Attribution 4.0 International License, which allows reusers to distribute, remix, adapt, and build upon the material in any medium or format, so long as attribution is given to the creator. The license allows for commercial use. |
spellingShingle | Article Sylwestrak, Emily L. Jo, YoungJu Vesuna, Sam Wang, Xiao Holcomb, Blake Tien, Rebecca H. Kim, Doo Kyung Fenno, Lief Ramakrishnan, Charu Allen, William E. Chen, Ritchie Shenoy, Krishna V. Sussillo, David Deisseroth, Karl Cell-type-specific population dynamics of diverse reward computations |
title | Cell-type-specific population dynamics of diverse reward computations |
title_full | Cell-type-specific population dynamics of diverse reward computations |
title_fullStr | Cell-type-specific population dynamics of diverse reward computations |
title_full_unstemmed | Cell-type-specific population dynamics of diverse reward computations |
title_short | Cell-type-specific population dynamics of diverse reward computations |
title_sort | cell-type-specific population dynamics of diverse reward computations |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10387374/ https://www.ncbi.nlm.nih.gov/pubmed/36113428 http://dx.doi.org/10.1016/j.cell.2022.08.019 |
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