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Cryogenic X-ray crystallographic studies of biomacromolecules at Turkish Light Source “Turkish DeLight”
X-ray crystallography is a robust and powerful structural biology technique that provides high-resolution atomic structures of biomacromolecules. Scientists use this technique to unravel mechanistic and structural details of biological macromolecules (e.g., proteins, nucleic acids, protein complexes...
Autores principales: | , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Scientific and Technological Research Council of Turkey (TUBITAK)
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10387866/ https://www.ncbi.nlm.nih.gov/pubmed/37529114 http://dx.doi.org/10.55730/1300-0152.2637 |
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author | ATALAY, Necati AKCAN, Enver Kamil GÜL, Mehmet AYAN, Esra DESTAN, Ebru ERTEM, Fatma Betül TOKAY, Nurettin ÇAKILKAYA, Barış NERGİZ, Zeliş KARAKADIOĞLU, Gözde KEPCEOĞLU, Abdullah YAPICI, İlkin TOSUN, Bilge BALDIR, Nilüfer YILDIRIM, Günseli JOHNSON, J Austin GÜVEN, Ömür SHAFIEI, Alaleh ARSLAN, Nazlı Eylül YILMAZ, Merve KULAKMAN, Cahine PAYDOS, Seyide Seda ÇİNAL, Zeynep Sena ŞABANOĞLU, Kardelen PAZARÇEVİREN, Ayşegül YILMAZ, Ayşenur CANBAY, Başak AŞCI, Bengisu KARTAL, Esra TAVLI, Serra ÇALISEKİ, Mehmet GÖÇ, Günce MERMER, Arif YEŞİLAY, Gamze ALTUNTAŞ, Sevde TATEISHI, Hiroshi OTSUKA, Masami FUJITA, Mikako TEKİN, Şaban ÇİFTÇİ, Halilibrahim DURDAĞI, Serdar DİNLER DOĞANAY, Gizem KARACA, Ezgi KAPLAN TÜRKÖZ, Burcu KABASAKAL, Burak Veli KATI, Ahmet DEMİRCİ, Hasan |
author_facet | ATALAY, Necati AKCAN, Enver Kamil GÜL, Mehmet AYAN, Esra DESTAN, Ebru ERTEM, Fatma Betül TOKAY, Nurettin ÇAKILKAYA, Barış NERGİZ, Zeliş KARAKADIOĞLU, Gözde KEPCEOĞLU, Abdullah YAPICI, İlkin TOSUN, Bilge BALDIR, Nilüfer YILDIRIM, Günseli JOHNSON, J Austin GÜVEN, Ömür SHAFIEI, Alaleh ARSLAN, Nazlı Eylül YILMAZ, Merve KULAKMAN, Cahine PAYDOS, Seyide Seda ÇİNAL, Zeynep Sena ŞABANOĞLU, Kardelen PAZARÇEVİREN, Ayşegül YILMAZ, Ayşenur CANBAY, Başak AŞCI, Bengisu KARTAL, Esra TAVLI, Serra ÇALISEKİ, Mehmet GÖÇ, Günce MERMER, Arif YEŞİLAY, Gamze ALTUNTAŞ, Sevde TATEISHI, Hiroshi OTSUKA, Masami FUJITA, Mikako TEKİN, Şaban ÇİFTÇİ, Halilibrahim DURDAĞI, Serdar DİNLER DOĞANAY, Gizem KARACA, Ezgi KAPLAN TÜRKÖZ, Burcu KABASAKAL, Burak Veli KATI, Ahmet DEMİRCİ, Hasan |
author_sort | ATALAY, Necati |
collection | PubMed |
description | X-ray crystallography is a robust and powerful structural biology technique that provides high-resolution atomic structures of biomacromolecules. Scientists use this technique to unravel mechanistic and structural details of biological macromolecules (e.g., proteins, nucleic acids, protein complexes, protein-nucleic acid complexes, or large biological compartments). Since its inception, single-crystal cryocrystallography has never been performed in Türkiye due to the lack of a single-crystal X-ray diffractometer. The X-ray diffraction facility recently established at the University of Health Sciences, İstanbul, Türkiye will enable Turkish and international researchers to easily perform high-resolution structural analysis of biomacromolecules from single crystals. Here, we describe the technical and practical outlook of a state-of-the-art home-source X-ray, using lysozyme as a model protein. The methods and practice described in this article can be applied to any biological sample for structural studies. Therefore, this article will be a valuable practical guide from sample preparation to data analysis. |
format | Online Article Text |
id | pubmed-10387866 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Scientific and Technological Research Council of Turkey (TUBITAK) |
record_format | MEDLINE/PubMed |
spelling | pubmed-103878662023-08-01 Cryogenic X-ray crystallographic studies of biomacromolecules at Turkish Light Source “Turkish DeLight” ATALAY, Necati AKCAN, Enver Kamil GÜL, Mehmet AYAN, Esra DESTAN, Ebru ERTEM, Fatma Betül TOKAY, Nurettin ÇAKILKAYA, Barış NERGİZ, Zeliş KARAKADIOĞLU, Gözde KEPCEOĞLU, Abdullah YAPICI, İlkin TOSUN, Bilge BALDIR, Nilüfer YILDIRIM, Günseli JOHNSON, J Austin GÜVEN, Ömür SHAFIEI, Alaleh ARSLAN, Nazlı Eylül YILMAZ, Merve KULAKMAN, Cahine PAYDOS, Seyide Seda ÇİNAL, Zeynep Sena ŞABANOĞLU, Kardelen PAZARÇEVİREN, Ayşegül YILMAZ, Ayşenur CANBAY, Başak AŞCI, Bengisu KARTAL, Esra TAVLI, Serra ÇALISEKİ, Mehmet GÖÇ, Günce MERMER, Arif YEŞİLAY, Gamze ALTUNTAŞ, Sevde TATEISHI, Hiroshi OTSUKA, Masami FUJITA, Mikako TEKİN, Şaban ÇİFTÇİ, Halilibrahim DURDAĞI, Serdar DİNLER DOĞANAY, Gizem KARACA, Ezgi KAPLAN TÜRKÖZ, Burcu KABASAKAL, Burak Veli KATI, Ahmet DEMİRCİ, Hasan Turk J Biol Research Article X-ray crystallography is a robust and powerful structural biology technique that provides high-resolution atomic structures of biomacromolecules. Scientists use this technique to unravel mechanistic and structural details of biological macromolecules (e.g., proteins, nucleic acids, protein complexes, protein-nucleic acid complexes, or large biological compartments). Since its inception, single-crystal cryocrystallography has never been performed in Türkiye due to the lack of a single-crystal X-ray diffractometer. The X-ray diffraction facility recently established at the University of Health Sciences, İstanbul, Türkiye will enable Turkish and international researchers to easily perform high-resolution structural analysis of biomacromolecules from single crystals. Here, we describe the technical and practical outlook of a state-of-the-art home-source X-ray, using lysozyme as a model protein. The methods and practice described in this article can be applied to any biological sample for structural studies. Therefore, this article will be a valuable practical guide from sample preparation to data analysis. Scientific and Technological Research Council of Turkey (TUBITAK) 2023-01-11 /pmc/articles/PMC10387866/ /pubmed/37529114 http://dx.doi.org/10.55730/1300-0152.2637 Text en © TÜBİTAK https://creativecommons.org/licenses/by/4.0/This work is licensed under a Creative Commons Attribution 4.0 International License. |
spellingShingle | Research Article ATALAY, Necati AKCAN, Enver Kamil GÜL, Mehmet AYAN, Esra DESTAN, Ebru ERTEM, Fatma Betül TOKAY, Nurettin ÇAKILKAYA, Barış NERGİZ, Zeliş KARAKADIOĞLU, Gözde KEPCEOĞLU, Abdullah YAPICI, İlkin TOSUN, Bilge BALDIR, Nilüfer YILDIRIM, Günseli JOHNSON, J Austin GÜVEN, Ömür SHAFIEI, Alaleh ARSLAN, Nazlı Eylül YILMAZ, Merve KULAKMAN, Cahine PAYDOS, Seyide Seda ÇİNAL, Zeynep Sena ŞABANOĞLU, Kardelen PAZARÇEVİREN, Ayşegül YILMAZ, Ayşenur CANBAY, Başak AŞCI, Bengisu KARTAL, Esra TAVLI, Serra ÇALISEKİ, Mehmet GÖÇ, Günce MERMER, Arif YEŞİLAY, Gamze ALTUNTAŞ, Sevde TATEISHI, Hiroshi OTSUKA, Masami FUJITA, Mikako TEKİN, Şaban ÇİFTÇİ, Halilibrahim DURDAĞI, Serdar DİNLER DOĞANAY, Gizem KARACA, Ezgi KAPLAN TÜRKÖZ, Burcu KABASAKAL, Burak Veli KATI, Ahmet DEMİRCİ, Hasan Cryogenic X-ray crystallographic studies of biomacromolecules at Turkish Light Source “Turkish DeLight” |
title | Cryogenic X-ray crystallographic studies of biomacromolecules at Turkish Light Source “Turkish DeLight” |
title_full | Cryogenic X-ray crystallographic studies of biomacromolecules at Turkish Light Source “Turkish DeLight” |
title_fullStr | Cryogenic X-ray crystallographic studies of biomacromolecules at Turkish Light Source “Turkish DeLight” |
title_full_unstemmed | Cryogenic X-ray crystallographic studies of biomacromolecules at Turkish Light Source “Turkish DeLight” |
title_short | Cryogenic X-ray crystallographic studies of biomacromolecules at Turkish Light Source “Turkish DeLight” |
title_sort | cryogenic x-ray crystallographic studies of biomacromolecules at turkish light source “turkish delight” |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10387866/ https://www.ncbi.nlm.nih.gov/pubmed/37529114 http://dx.doi.org/10.55730/1300-0152.2637 |
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