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From Microstates to Macrostates in the Conformational Dynamics of GroEL: A Single-Molecule Förster Resonance Energy Transfer Study

[Image: see text] The chaperonin GroEL is a multisubunit molecular machine that assists in protein folding in the Escherichia coli cytosol. Past studies have shown that GroEL undergoes large allosteric conformational changes during its reaction cycle. Here, we report single-molecule Förster resonanc...

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Autores principales: Liebermann, Demian G., Jungwirth, Jakub, Riven, Inbal, Barak, Yoav, Levy, Dorit, Horovitz, Amnon, Haran, Gilad
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2023
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10388350/
https://www.ncbi.nlm.nih.gov/pubmed/37440608
http://dx.doi.org/10.1021/acs.jpclett.3c01281
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author Liebermann, Demian G.
Jungwirth, Jakub
Riven, Inbal
Barak, Yoav
Levy, Dorit
Horovitz, Amnon
Haran, Gilad
author_facet Liebermann, Demian G.
Jungwirth, Jakub
Riven, Inbal
Barak, Yoav
Levy, Dorit
Horovitz, Amnon
Haran, Gilad
author_sort Liebermann, Demian G.
collection PubMed
description [Image: see text] The chaperonin GroEL is a multisubunit molecular machine that assists in protein folding in the Escherichia coli cytosol. Past studies have shown that GroEL undergoes large allosteric conformational changes during its reaction cycle. Here, we report single-molecule Förster resonance energy transfer measurements that directly probe the conformational transitions of one subunit within GroEL and its single-ring variant under equilibrium conditions. We find that four microstates span the conformational manifold of the protein and interconvert on the submillisecond time scale. A unique set of relative populations of these microstates, termed a macrostate, is obtained by varying solution conditions, e.g., adding different nucleotides or the cochaperone GroES. Strikingly, ATP titration studies demonstrate that the partition between the apo and ATP-ligated conformational macrostates traces a sigmoidal response with a Hill coefficient similar to that obtained in bulk experiments of ATP hydrolysis. These coinciding results from bulk measurements for an entire ring and single-molecule measurements for a single subunit provide new evidence for the concerted allosteric transition of all seven subunits.
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spelling pubmed-103883502023-08-01 From Microstates to Macrostates in the Conformational Dynamics of GroEL: A Single-Molecule Förster Resonance Energy Transfer Study Liebermann, Demian G. Jungwirth, Jakub Riven, Inbal Barak, Yoav Levy, Dorit Horovitz, Amnon Haran, Gilad J Phys Chem Lett [Image: see text] The chaperonin GroEL is a multisubunit molecular machine that assists in protein folding in the Escherichia coli cytosol. Past studies have shown that GroEL undergoes large allosteric conformational changes during its reaction cycle. Here, we report single-molecule Förster resonance energy transfer measurements that directly probe the conformational transitions of one subunit within GroEL and its single-ring variant under equilibrium conditions. We find that four microstates span the conformational manifold of the protein and interconvert on the submillisecond time scale. A unique set of relative populations of these microstates, termed a macrostate, is obtained by varying solution conditions, e.g., adding different nucleotides or the cochaperone GroES. Strikingly, ATP titration studies demonstrate that the partition between the apo and ATP-ligated conformational macrostates traces a sigmoidal response with a Hill coefficient similar to that obtained in bulk experiments of ATP hydrolysis. These coinciding results from bulk measurements for an entire ring and single-molecule measurements for a single subunit provide new evidence for the concerted allosteric transition of all seven subunits. American Chemical Society 2023-07-13 /pmc/articles/PMC10388350/ /pubmed/37440608 http://dx.doi.org/10.1021/acs.jpclett.3c01281 Text en © 2023 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by/4.0/Permits the broadest form of re-use including for commercial purposes, provided that author attribution and integrity are maintained (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Liebermann, Demian G.
Jungwirth, Jakub
Riven, Inbal
Barak, Yoav
Levy, Dorit
Horovitz, Amnon
Haran, Gilad
From Microstates to Macrostates in the Conformational Dynamics of GroEL: A Single-Molecule Förster Resonance Energy Transfer Study
title From Microstates to Macrostates in the Conformational Dynamics of GroEL: A Single-Molecule Förster Resonance Energy Transfer Study
title_full From Microstates to Macrostates in the Conformational Dynamics of GroEL: A Single-Molecule Förster Resonance Energy Transfer Study
title_fullStr From Microstates to Macrostates in the Conformational Dynamics of GroEL: A Single-Molecule Förster Resonance Energy Transfer Study
title_full_unstemmed From Microstates to Macrostates in the Conformational Dynamics of GroEL: A Single-Molecule Förster Resonance Energy Transfer Study
title_short From Microstates to Macrostates in the Conformational Dynamics of GroEL: A Single-Molecule Förster Resonance Energy Transfer Study
title_sort from microstates to macrostates in the conformational dynamics of groel: a single-molecule förster resonance energy transfer study
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10388350/
https://www.ncbi.nlm.nih.gov/pubmed/37440608
http://dx.doi.org/10.1021/acs.jpclett.3c01281
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