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From Microstates to Macrostates in the Conformational Dynamics of GroEL: A Single-Molecule Förster Resonance Energy Transfer Study
[Image: see text] The chaperonin GroEL is a multisubunit molecular machine that assists in protein folding in the Escherichia coli cytosol. Past studies have shown that GroEL undergoes large allosteric conformational changes during its reaction cycle. Here, we report single-molecule Förster resonanc...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Chemical Society
2023
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10388350/ https://www.ncbi.nlm.nih.gov/pubmed/37440608 http://dx.doi.org/10.1021/acs.jpclett.3c01281 |
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author | Liebermann, Demian G. Jungwirth, Jakub Riven, Inbal Barak, Yoav Levy, Dorit Horovitz, Amnon Haran, Gilad |
author_facet | Liebermann, Demian G. Jungwirth, Jakub Riven, Inbal Barak, Yoav Levy, Dorit Horovitz, Amnon Haran, Gilad |
author_sort | Liebermann, Demian G. |
collection | PubMed |
description | [Image: see text] The chaperonin GroEL is a multisubunit molecular machine that assists in protein folding in the Escherichia coli cytosol. Past studies have shown that GroEL undergoes large allosteric conformational changes during its reaction cycle. Here, we report single-molecule Förster resonance energy transfer measurements that directly probe the conformational transitions of one subunit within GroEL and its single-ring variant under equilibrium conditions. We find that four microstates span the conformational manifold of the protein and interconvert on the submillisecond time scale. A unique set of relative populations of these microstates, termed a macrostate, is obtained by varying solution conditions, e.g., adding different nucleotides or the cochaperone GroES. Strikingly, ATP titration studies demonstrate that the partition between the apo and ATP-ligated conformational macrostates traces a sigmoidal response with a Hill coefficient similar to that obtained in bulk experiments of ATP hydrolysis. These coinciding results from bulk measurements for an entire ring and single-molecule measurements for a single subunit provide new evidence for the concerted allosteric transition of all seven subunits. |
format | Online Article Text |
id | pubmed-10388350 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | American Chemical Society |
record_format | MEDLINE/PubMed |
spelling | pubmed-103883502023-08-01 From Microstates to Macrostates in the Conformational Dynamics of GroEL: A Single-Molecule Förster Resonance Energy Transfer Study Liebermann, Demian G. Jungwirth, Jakub Riven, Inbal Barak, Yoav Levy, Dorit Horovitz, Amnon Haran, Gilad J Phys Chem Lett [Image: see text] The chaperonin GroEL is a multisubunit molecular machine that assists in protein folding in the Escherichia coli cytosol. Past studies have shown that GroEL undergoes large allosteric conformational changes during its reaction cycle. Here, we report single-molecule Förster resonance energy transfer measurements that directly probe the conformational transitions of one subunit within GroEL and its single-ring variant under equilibrium conditions. We find that four microstates span the conformational manifold of the protein and interconvert on the submillisecond time scale. A unique set of relative populations of these microstates, termed a macrostate, is obtained by varying solution conditions, e.g., adding different nucleotides or the cochaperone GroES. Strikingly, ATP titration studies demonstrate that the partition between the apo and ATP-ligated conformational macrostates traces a sigmoidal response with a Hill coefficient similar to that obtained in bulk experiments of ATP hydrolysis. These coinciding results from bulk measurements for an entire ring and single-molecule measurements for a single subunit provide new evidence for the concerted allosteric transition of all seven subunits. American Chemical Society 2023-07-13 /pmc/articles/PMC10388350/ /pubmed/37440608 http://dx.doi.org/10.1021/acs.jpclett.3c01281 Text en © 2023 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by/4.0/Permits the broadest form of re-use including for commercial purposes, provided that author attribution and integrity are maintained (https://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Liebermann, Demian G. Jungwirth, Jakub Riven, Inbal Barak, Yoav Levy, Dorit Horovitz, Amnon Haran, Gilad From Microstates to Macrostates in the Conformational Dynamics of GroEL: A Single-Molecule Förster Resonance Energy Transfer Study |
title | From Microstates
to Macrostates in the Conformational
Dynamics of GroEL: A Single-Molecule Förster Resonance Energy
Transfer Study |
title_full | From Microstates
to Macrostates in the Conformational
Dynamics of GroEL: A Single-Molecule Förster Resonance Energy
Transfer Study |
title_fullStr | From Microstates
to Macrostates in the Conformational
Dynamics of GroEL: A Single-Molecule Förster Resonance Energy
Transfer Study |
title_full_unstemmed | From Microstates
to Macrostates in the Conformational
Dynamics of GroEL: A Single-Molecule Förster Resonance Energy
Transfer Study |
title_short | From Microstates
to Macrostates in the Conformational
Dynamics of GroEL: A Single-Molecule Förster Resonance Energy
Transfer Study |
title_sort | from microstates
to macrostates in the conformational
dynamics of groel: a single-molecule förster resonance energy
transfer study |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10388350/ https://www.ncbi.nlm.nih.gov/pubmed/37440608 http://dx.doi.org/10.1021/acs.jpclett.3c01281 |
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