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Chlorate-induced molecular floral transition revealed by transcriptomes
Flowering in off-season longan (Dimocarpus longan L.) can be induced effectively by the application of potassium chlorate (KClO(3)), but the mechanism of the physiological induction is largely unknown to decipher its mechanism and identify genes potentially regulating the process, and comparative an...
Autores principales: | , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
De Gruyter
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10389677/ https://www.ncbi.nlm.nih.gov/pubmed/37528883 http://dx.doi.org/10.1515/biol-2022-0612 |
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author | Li, Songgang Chen, Houbin Hong, Jiwang Ye, Xiuxu Wang, Jiabao Chen, Yeyuan Zhang, Lei Su, Zuanxian Yang, Ziqin |
author_facet | Li, Songgang Chen, Houbin Hong, Jiwang Ye, Xiuxu Wang, Jiabao Chen, Yeyuan Zhang, Lei Su, Zuanxian Yang, Ziqin |
author_sort | Li, Songgang |
collection | PubMed |
description | Flowering in off-season longan (Dimocarpus longan L.) can be induced effectively by the application of potassium chlorate (KClO(3)), but the mechanism of the physiological induction is largely unknown to decipher its mechanism and identify genes potentially regulating the process, and comparative analysis via RNA-Seq was performed between vegetative and KClO(3)-induced floral buds. A total of 18,649 differentially expressed genes (DEGs) were identified between control and treated samples. Gene ontology and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis revealed that DEGs related to plant hormone signal transduction, mitogen-activated protein kinase (MAPK) signaling pathway, starch and sucrose metabolism, and phenylpropanoid biosynthesis were enriched in our data. A total of 29 flowering-related DEGs were identified in our study, such as APETALA1 (AP1), APETALA2 (AP2), AUXIN RESPONSE FACTOR 3/ETTIN (ARF3), SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 8 (SPL8), AGAMOUS (AG), and others. The upregulation of AP2 and SPL genes indicates that the age-related pathway is activated and influences the floral induction in KClO(3)-induced longan floral buds by coordinated regulation of genes related to AP1, AG, and ARF3. This study provides a valuable resource for studying molecular mechanisms underlying chlorate-induced floral transition in off-season longan, which may benefit the development and production of off-season tropical/subtropical fruit trees. |
format | Online Article Text |
id | pubmed-10389677 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | De Gruyter |
record_format | MEDLINE/PubMed |
spelling | pubmed-103896772023-08-01 Chlorate-induced molecular floral transition revealed by transcriptomes Li, Songgang Chen, Houbin Hong, Jiwang Ye, Xiuxu Wang, Jiabao Chen, Yeyuan Zhang, Lei Su, Zuanxian Yang, Ziqin Open Life Sci Research Article Flowering in off-season longan (Dimocarpus longan L.) can be induced effectively by the application of potassium chlorate (KClO(3)), but the mechanism of the physiological induction is largely unknown to decipher its mechanism and identify genes potentially regulating the process, and comparative analysis via RNA-Seq was performed between vegetative and KClO(3)-induced floral buds. A total of 18,649 differentially expressed genes (DEGs) were identified between control and treated samples. Gene ontology and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis revealed that DEGs related to plant hormone signal transduction, mitogen-activated protein kinase (MAPK) signaling pathway, starch and sucrose metabolism, and phenylpropanoid biosynthesis were enriched in our data. A total of 29 flowering-related DEGs were identified in our study, such as APETALA1 (AP1), APETALA2 (AP2), AUXIN RESPONSE FACTOR 3/ETTIN (ARF3), SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 8 (SPL8), AGAMOUS (AG), and others. The upregulation of AP2 and SPL genes indicates that the age-related pathway is activated and influences the floral induction in KClO(3)-induced longan floral buds by coordinated regulation of genes related to AP1, AG, and ARF3. This study provides a valuable resource for studying molecular mechanisms underlying chlorate-induced floral transition in off-season longan, which may benefit the development and production of off-season tropical/subtropical fruit trees. De Gruyter 2023-07-29 /pmc/articles/PMC10389677/ /pubmed/37528883 http://dx.doi.org/10.1515/biol-2022-0612 Text en © 2023 the author(s), published by De Gruyter https://creativecommons.org/licenses/by/4.0/This work is licensed under the Creative Commons Attribution 4.0 International License. |
spellingShingle | Research Article Li, Songgang Chen, Houbin Hong, Jiwang Ye, Xiuxu Wang, Jiabao Chen, Yeyuan Zhang, Lei Su, Zuanxian Yang, Ziqin Chlorate-induced molecular floral transition revealed by transcriptomes |
title | Chlorate-induced molecular floral transition revealed by transcriptomes |
title_full | Chlorate-induced molecular floral transition revealed by transcriptomes |
title_fullStr | Chlorate-induced molecular floral transition revealed by transcriptomes |
title_full_unstemmed | Chlorate-induced molecular floral transition revealed by transcriptomes |
title_short | Chlorate-induced molecular floral transition revealed by transcriptomes |
title_sort | chlorate-induced molecular floral transition revealed by transcriptomes |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10389677/ https://www.ncbi.nlm.nih.gov/pubmed/37528883 http://dx.doi.org/10.1515/biol-2022-0612 |
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