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Chlorate-induced molecular floral transition revealed by transcriptomes

Flowering in off-season longan (Dimocarpus longan L.) can be induced effectively by the application of potassium chlorate (KClO(3)), but the mechanism of the physiological induction is largely unknown to decipher its mechanism and identify genes potentially regulating the process, and comparative an...

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Autores principales: Li, Songgang, Chen, Houbin, Hong, Jiwang, Ye, Xiuxu, Wang, Jiabao, Chen, Yeyuan, Zhang, Lei, Su, Zuanxian, Yang, Ziqin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: De Gruyter 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10389677/
https://www.ncbi.nlm.nih.gov/pubmed/37528883
http://dx.doi.org/10.1515/biol-2022-0612
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author Li, Songgang
Chen, Houbin
Hong, Jiwang
Ye, Xiuxu
Wang, Jiabao
Chen, Yeyuan
Zhang, Lei
Su, Zuanxian
Yang, Ziqin
author_facet Li, Songgang
Chen, Houbin
Hong, Jiwang
Ye, Xiuxu
Wang, Jiabao
Chen, Yeyuan
Zhang, Lei
Su, Zuanxian
Yang, Ziqin
author_sort Li, Songgang
collection PubMed
description Flowering in off-season longan (Dimocarpus longan L.) can be induced effectively by the application of potassium chlorate (KClO(3)), but the mechanism of the physiological induction is largely unknown to decipher its mechanism and identify genes potentially regulating the process, and comparative analysis via RNA-Seq was performed between vegetative and KClO(3)-induced floral buds. A total of 18,649 differentially expressed genes (DEGs) were identified between control and treated samples. Gene ontology and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis revealed that DEGs related to plant hormone signal transduction, mitogen-activated protein kinase (MAPK) signaling pathway, starch and sucrose metabolism, and phenylpropanoid biosynthesis were enriched in our data. A total of 29 flowering-related DEGs were identified in our study, such as APETALA1 (AP1), APETALA2 (AP2), AUXIN RESPONSE FACTOR 3/ETTIN (ARF3), SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 8 (SPL8), AGAMOUS (AG), and others. The upregulation of AP2 and SPL genes indicates that the age-related pathway is activated and influences the floral induction in KClO(3)-induced longan floral buds by coordinated regulation of genes related to AP1, AG, and ARF3. This study provides a valuable resource for studying molecular mechanisms underlying chlorate-induced floral transition in off-season longan, which may benefit the development and production of off-season tropical/subtropical fruit trees.
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spelling pubmed-103896772023-08-01 Chlorate-induced molecular floral transition revealed by transcriptomes Li, Songgang Chen, Houbin Hong, Jiwang Ye, Xiuxu Wang, Jiabao Chen, Yeyuan Zhang, Lei Su, Zuanxian Yang, Ziqin Open Life Sci Research Article Flowering in off-season longan (Dimocarpus longan L.) can be induced effectively by the application of potassium chlorate (KClO(3)), but the mechanism of the physiological induction is largely unknown to decipher its mechanism and identify genes potentially regulating the process, and comparative analysis via RNA-Seq was performed between vegetative and KClO(3)-induced floral buds. A total of 18,649 differentially expressed genes (DEGs) were identified between control and treated samples. Gene ontology and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway analysis revealed that DEGs related to plant hormone signal transduction, mitogen-activated protein kinase (MAPK) signaling pathway, starch and sucrose metabolism, and phenylpropanoid biosynthesis were enriched in our data. A total of 29 flowering-related DEGs were identified in our study, such as APETALA1 (AP1), APETALA2 (AP2), AUXIN RESPONSE FACTOR 3/ETTIN (ARF3), SQUAMOSA PROMOTER BINDING PROTEIN-LIKE 8 (SPL8), AGAMOUS (AG), and others. The upregulation of AP2 and SPL genes indicates that the age-related pathway is activated and influences the floral induction in KClO(3)-induced longan floral buds by coordinated regulation of genes related to AP1, AG, and ARF3. This study provides a valuable resource for studying molecular mechanisms underlying chlorate-induced floral transition in off-season longan, which may benefit the development and production of off-season tropical/subtropical fruit trees. De Gruyter 2023-07-29 /pmc/articles/PMC10389677/ /pubmed/37528883 http://dx.doi.org/10.1515/biol-2022-0612 Text en © 2023 the author(s), published by De Gruyter https://creativecommons.org/licenses/by/4.0/This work is licensed under the Creative Commons Attribution 4.0 International License.
spellingShingle Research Article
Li, Songgang
Chen, Houbin
Hong, Jiwang
Ye, Xiuxu
Wang, Jiabao
Chen, Yeyuan
Zhang, Lei
Su, Zuanxian
Yang, Ziqin
Chlorate-induced molecular floral transition revealed by transcriptomes
title Chlorate-induced molecular floral transition revealed by transcriptomes
title_full Chlorate-induced molecular floral transition revealed by transcriptomes
title_fullStr Chlorate-induced molecular floral transition revealed by transcriptomes
title_full_unstemmed Chlorate-induced molecular floral transition revealed by transcriptomes
title_short Chlorate-induced molecular floral transition revealed by transcriptomes
title_sort chlorate-induced molecular floral transition revealed by transcriptomes
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10389677/
https://www.ncbi.nlm.nih.gov/pubmed/37528883
http://dx.doi.org/10.1515/biol-2022-0612
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