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Integrated analysis identifies microRNA‐188‐5p as a suppressor of AKT/mTOR pathway in renal cancer

Many current microRNA (miRNA) expression datasets for renal cell carcinoma (RCC) often show inconsistent analysis results, so a shift to comprehensive analysis of multiple datasets can effectively accelerate molecular screening for precision medicine and translational medicine research. MicroRNA (mi...

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Autores principales: Shen, Hui, Jin, Jing, Wang, Hang, Yu, Nanxi, Liu, Tingting, Sheng, Han, Wan, Zhijie, Feng, Chao, Huang, Yijuan, Gao, Fu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10394144/
https://www.ncbi.nlm.nih.gov/pubmed/37199297
http://dx.doi.org/10.1111/cas.15832
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author Shen, Hui
Jin, Jing
Wang, Hang
Yu, Nanxi
Liu, Tingting
Sheng, Han
Wan, Zhijie
Feng, Chao
Huang, Yijuan
Gao, Fu
author_facet Shen, Hui
Jin, Jing
Wang, Hang
Yu, Nanxi
Liu, Tingting
Sheng, Han
Wan, Zhijie
Feng, Chao
Huang, Yijuan
Gao, Fu
author_sort Shen, Hui
collection PubMed
description Many current microRNA (miRNA) expression datasets for renal cell carcinoma (RCC) often show inconsistent analysis results, so a shift to comprehensive analysis of multiple datasets can effectively accelerate molecular screening for precision medicine and translational medicine research. MicroRNA (miR)‐188‐5p is a clinically noteworthy miRNA whose aberrant expression was previously observed in a variety of cancers, but its role in RCC is unclear. In this study, we undertook a comprehensive analysis of four RCC miRNA expression datasets and validated the results using The Cancer Genome Atlas (TCGA) dataset and a cohort of collected clinical samples. Fifteen miRNAs were identified as potential diagnostic markers by the analysis of four RCC miRNAs datasets. Analysis of the TCGA kidney renal clear cell carcinoma dataset showed significantly shorter survival in RCC patients with reduced miR‐188‐5p expression levels, and our collection of RCC clinical samples showed low miR‐188‐5p expression in the tumors. Overexpression of miR‐188‐5p in Caki‐1 and 786‐O cells inhibited cell growth, colony formation, invasion, and migration. In contrast, miR‐188‐5p inhibitors reversed these cell phenotypes. We identified a binding site for miR‐188‐5p in the 3′‐UTR region of myristoylated alanine‐rich C‐kinase substrate (MARCKS) mRNA and demonstrated an interaction between these two molecules. Quantitative RT‐PCR and western blot analysis revealed that miR‐188‐5p could regulate the AKT/mTOR signaling pathway through MARCKS. Mouse transplantation tumor assay indicated that miR‐188‐5p reduced the tumorigenicity of RCC in vivo. MicroRNA‐188‐5p could be a valuable new molecule for RCC diagnosis and prognosis.
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spelling pubmed-103941442023-08-03 Integrated analysis identifies microRNA‐188‐5p as a suppressor of AKT/mTOR pathway in renal cancer Shen, Hui Jin, Jing Wang, Hang Yu, Nanxi Liu, Tingting Sheng, Han Wan, Zhijie Feng, Chao Huang, Yijuan Gao, Fu Cancer Sci Original Articles Many current microRNA (miRNA) expression datasets for renal cell carcinoma (RCC) often show inconsistent analysis results, so a shift to comprehensive analysis of multiple datasets can effectively accelerate molecular screening for precision medicine and translational medicine research. MicroRNA (miR)‐188‐5p is a clinically noteworthy miRNA whose aberrant expression was previously observed in a variety of cancers, but its role in RCC is unclear. In this study, we undertook a comprehensive analysis of four RCC miRNA expression datasets and validated the results using The Cancer Genome Atlas (TCGA) dataset and a cohort of collected clinical samples. Fifteen miRNAs were identified as potential diagnostic markers by the analysis of four RCC miRNAs datasets. Analysis of the TCGA kidney renal clear cell carcinoma dataset showed significantly shorter survival in RCC patients with reduced miR‐188‐5p expression levels, and our collection of RCC clinical samples showed low miR‐188‐5p expression in the tumors. Overexpression of miR‐188‐5p in Caki‐1 and 786‐O cells inhibited cell growth, colony formation, invasion, and migration. In contrast, miR‐188‐5p inhibitors reversed these cell phenotypes. We identified a binding site for miR‐188‐5p in the 3′‐UTR region of myristoylated alanine‐rich C‐kinase substrate (MARCKS) mRNA and demonstrated an interaction between these two molecules. Quantitative RT‐PCR and western blot analysis revealed that miR‐188‐5p could regulate the AKT/mTOR signaling pathway through MARCKS. Mouse transplantation tumor assay indicated that miR‐188‐5p reduced the tumorigenicity of RCC in vivo. MicroRNA‐188‐5p could be a valuable new molecule for RCC diagnosis and prognosis. John Wiley and Sons Inc. 2023-05-18 /pmc/articles/PMC10394144/ /pubmed/37199297 http://dx.doi.org/10.1111/cas.15832 Text en © 2023 The Authors. Cancer Science published by John Wiley & Sons Australia, Ltd on behalf of Japanese Cancer Association. https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by-nc-nd/4.0/ (https://creativecommons.org/licenses/by-nc-nd/4.0/) License, which permits use and distribution in any medium, provided the original work is properly cited, the use is non‐commercial and no modifications or adaptations are made.
spellingShingle Original Articles
Shen, Hui
Jin, Jing
Wang, Hang
Yu, Nanxi
Liu, Tingting
Sheng, Han
Wan, Zhijie
Feng, Chao
Huang, Yijuan
Gao, Fu
Integrated analysis identifies microRNA‐188‐5p as a suppressor of AKT/mTOR pathway in renal cancer
title Integrated analysis identifies microRNA‐188‐5p as a suppressor of AKT/mTOR pathway in renal cancer
title_full Integrated analysis identifies microRNA‐188‐5p as a suppressor of AKT/mTOR pathway in renal cancer
title_fullStr Integrated analysis identifies microRNA‐188‐5p as a suppressor of AKT/mTOR pathway in renal cancer
title_full_unstemmed Integrated analysis identifies microRNA‐188‐5p as a suppressor of AKT/mTOR pathway in renal cancer
title_short Integrated analysis identifies microRNA‐188‐5p as a suppressor of AKT/mTOR pathway in renal cancer
title_sort integrated analysis identifies microrna‐188‐5p as a suppressor of akt/mtor pathway in renal cancer
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10394144/
https://www.ncbi.nlm.nih.gov/pubmed/37199297
http://dx.doi.org/10.1111/cas.15832
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