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Automated Detection of Anatomical Landmarks During Colonoscopy Using a Deep Learning Model

BACKGROUND AND AIMS: Identification and photo-documentation of the ileocecal valve (ICV) and appendiceal orifice (AO) confirm completeness of colonoscopy examinations. We aimed to develop and test a deep convolutional neural network (DCNN) model that can automatically identify ICV and AO, and differ...

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Autores principales: Taghiakbari, Mahsa, Hamidi Ghalehjegh, Sina, Jehanno, Emmanuel, Berthier, Tess, di Jorio, Lisa, Ghadakzadeh, Saber, Barkun, Alan, Takla, Mark, Bouin, Mickael, Deslandres, Eric, Bouchard, Simon, Sidani, Sacha, Bengio, Yoshua, von Renteln, Daniel
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Oxford University Press 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10395661/
https://www.ncbi.nlm.nih.gov/pubmed/37538187
http://dx.doi.org/10.1093/jcag/gwad017
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author Taghiakbari, Mahsa
Hamidi Ghalehjegh, Sina
Jehanno, Emmanuel
Berthier, Tess
di Jorio, Lisa
Ghadakzadeh, Saber
Barkun, Alan
Takla, Mark
Bouin, Mickael
Deslandres, Eric
Bouchard, Simon
Sidani, Sacha
Bengio, Yoshua
von Renteln, Daniel
author_facet Taghiakbari, Mahsa
Hamidi Ghalehjegh, Sina
Jehanno, Emmanuel
Berthier, Tess
di Jorio, Lisa
Ghadakzadeh, Saber
Barkun, Alan
Takla, Mark
Bouin, Mickael
Deslandres, Eric
Bouchard, Simon
Sidani, Sacha
Bengio, Yoshua
von Renteln, Daniel
author_sort Taghiakbari, Mahsa
collection PubMed
description BACKGROUND AND AIMS: Identification and photo-documentation of the ileocecal valve (ICV) and appendiceal orifice (AO) confirm completeness of colonoscopy examinations. We aimed to develop and test a deep convolutional neural network (DCNN) model that can automatically identify ICV and AO, and differentiate these landmarks from normal mucosa and colorectal polyps. METHODS: We prospectively collected annotated full-length colonoscopy videos of 318 patients undergoing outpatient colonoscopies. We created three nonoverlapping training, validation, and test data sets with 25,444 unaltered frames extracted from the colonoscopy videos showing four landmarks/image classes (AO, ICV, normal mucosa, and polyps). A DCNN classification model was developed, validated, and tested in separate data sets of images containing the four different landmarks. RESULTS: After training and validation, the DCNN model could identify both AO and ICV in 18 out of 21 patients (85.7%). The accuracy of the model for differentiating AO from normal mucosa, and ICV from normal mucosa were 86.4% (95% CI 84.1% to 88.5%), and 86.4% (95% CI 84.1% to 88.6%), respectively. Furthermore, the accuracy of the model for differentiating polyps from normal mucosa was 88.6% (95% CI 86.6% to 90.3%). CONCLUSION: This model offers a novel tool to assist endoscopists with automated identification of AO and ICV during colonoscopy. The model can reliably distinguish these anatomical landmarks from normal mucosa and colorectal polyps. It can be implemented into automated colonoscopy report generation, photo-documentation, and quality auditing solutions to improve colonoscopy reporting quality.
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spelling pubmed-103956612023-08-03 Automated Detection of Anatomical Landmarks During Colonoscopy Using a Deep Learning Model Taghiakbari, Mahsa Hamidi Ghalehjegh, Sina Jehanno, Emmanuel Berthier, Tess di Jorio, Lisa Ghadakzadeh, Saber Barkun, Alan Takla, Mark Bouin, Mickael Deslandres, Eric Bouchard, Simon Sidani, Sacha Bengio, Yoshua von Renteln, Daniel J Can Assoc Gastroenterol Original Articles BACKGROUND AND AIMS: Identification and photo-documentation of the ileocecal valve (ICV) and appendiceal orifice (AO) confirm completeness of colonoscopy examinations. We aimed to develop and test a deep convolutional neural network (DCNN) model that can automatically identify ICV and AO, and differentiate these landmarks from normal mucosa and colorectal polyps. METHODS: We prospectively collected annotated full-length colonoscopy videos of 318 patients undergoing outpatient colonoscopies. We created three nonoverlapping training, validation, and test data sets with 25,444 unaltered frames extracted from the colonoscopy videos showing four landmarks/image classes (AO, ICV, normal mucosa, and polyps). A DCNN classification model was developed, validated, and tested in separate data sets of images containing the four different landmarks. RESULTS: After training and validation, the DCNN model could identify both AO and ICV in 18 out of 21 patients (85.7%). The accuracy of the model for differentiating AO from normal mucosa, and ICV from normal mucosa were 86.4% (95% CI 84.1% to 88.5%), and 86.4% (95% CI 84.1% to 88.6%), respectively. Furthermore, the accuracy of the model for differentiating polyps from normal mucosa was 88.6% (95% CI 86.6% to 90.3%). CONCLUSION: This model offers a novel tool to assist endoscopists with automated identification of AO and ICV during colonoscopy. The model can reliably distinguish these anatomical landmarks from normal mucosa and colorectal polyps. It can be implemented into automated colonoscopy report generation, photo-documentation, and quality auditing solutions to improve colonoscopy reporting quality. Oxford University Press 2023-05-02 /pmc/articles/PMC10395661/ /pubmed/37538187 http://dx.doi.org/10.1093/jcag/gwad017 Text en © The Author(s) 2023. Published by Oxford University Press on behalf of the Canadian Association of Gastroenterology. https://creativecommons.org/licenses/by/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Original Articles
Taghiakbari, Mahsa
Hamidi Ghalehjegh, Sina
Jehanno, Emmanuel
Berthier, Tess
di Jorio, Lisa
Ghadakzadeh, Saber
Barkun, Alan
Takla, Mark
Bouin, Mickael
Deslandres, Eric
Bouchard, Simon
Sidani, Sacha
Bengio, Yoshua
von Renteln, Daniel
Automated Detection of Anatomical Landmarks During Colonoscopy Using a Deep Learning Model
title Automated Detection of Anatomical Landmarks During Colonoscopy Using a Deep Learning Model
title_full Automated Detection of Anatomical Landmarks During Colonoscopy Using a Deep Learning Model
title_fullStr Automated Detection of Anatomical Landmarks During Colonoscopy Using a Deep Learning Model
title_full_unstemmed Automated Detection of Anatomical Landmarks During Colonoscopy Using a Deep Learning Model
title_short Automated Detection of Anatomical Landmarks During Colonoscopy Using a Deep Learning Model
title_sort automated detection of anatomical landmarks during colonoscopy using a deep learning model
topic Original Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10395661/
https://www.ncbi.nlm.nih.gov/pubmed/37538187
http://dx.doi.org/10.1093/jcag/gwad017
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