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Identification of DUSP7 as an RNA Marker for Prognostic Stratification in Acute Myeloid Leukemia: Evidence from Large Population Cohorts
BACKGROUND: The problem of prognostic stratification in acute myeloid leukemia (AML) patients still has limitations. METHODS: The expression profile data and clinical features of AML patients were obtained from multiple publicly available sources, including GSE71014, TCGA-LAML, and TARGET-AML. Singl...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Hindawi
2023
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10396553/ https://www.ncbi.nlm.nih.gov/pubmed/37538139 http://dx.doi.org/10.1155/2023/4348290 |
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author | Gao, Xin |
author_facet | Gao, Xin |
author_sort | Gao, Xin |
collection | PubMed |
description | BACKGROUND: The problem of prognostic stratification in acute myeloid leukemia (AML) patients still has limitations. METHODS: The expression profile data and clinical features of AML patients were obtained from multiple publicly available sources, including GSE71014, TCGA-LAML, and TARGET-AML. Single-cell analysis was performed using the TISCH project. All the analysis was conducted in the R software. RESULTS: In our study, three public AML cohorts, GSE71014, TARGET-AML, and TCGA-AML, were selected. Then, we identified the prognosis-related molecules through bioinformatic analysis. Finally, the DUSP7 was noticed as a risk factor for AML patients, which has not been reported previously. Biological enrichment analysis and immune-related analysis were performed to illustrate the role of DUSP7 in AML. Single-cell analysis indicated that the DUSP7 was widely distributed in various cells, especially in monocyte/macrophages and malignant. Following this, a prognosis model based on DUSP7-derived genes was constructed, which showed a good prognosis prediction ability in all cohorts. CONCLUSIONS: Our results preliminarily reveal the role and potential mechanism of DUSP7 in AML, providing direction for future research. |
format | Online Article Text |
id | pubmed-10396553 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Hindawi |
record_format | MEDLINE/PubMed |
spelling | pubmed-103965532023-08-03 Identification of DUSP7 as an RNA Marker for Prognostic Stratification in Acute Myeloid Leukemia: Evidence from Large Population Cohorts Gao, Xin Genet Res (Camb) Research Article BACKGROUND: The problem of prognostic stratification in acute myeloid leukemia (AML) patients still has limitations. METHODS: The expression profile data and clinical features of AML patients were obtained from multiple publicly available sources, including GSE71014, TCGA-LAML, and TARGET-AML. Single-cell analysis was performed using the TISCH project. All the analysis was conducted in the R software. RESULTS: In our study, three public AML cohorts, GSE71014, TARGET-AML, and TCGA-AML, were selected. Then, we identified the prognosis-related molecules through bioinformatic analysis. Finally, the DUSP7 was noticed as a risk factor for AML patients, which has not been reported previously. Biological enrichment analysis and immune-related analysis were performed to illustrate the role of DUSP7 in AML. Single-cell analysis indicated that the DUSP7 was widely distributed in various cells, especially in monocyte/macrophages and malignant. Following this, a prognosis model based on DUSP7-derived genes was constructed, which showed a good prognosis prediction ability in all cohorts. CONCLUSIONS: Our results preliminarily reveal the role and potential mechanism of DUSP7 in AML, providing direction for future research. Hindawi 2023-07-26 /pmc/articles/PMC10396553/ /pubmed/37538139 http://dx.doi.org/10.1155/2023/4348290 Text en Copyright © 2023 Xin Gao. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Research Article Gao, Xin Identification of DUSP7 as an RNA Marker for Prognostic Stratification in Acute Myeloid Leukemia: Evidence from Large Population Cohorts |
title | Identification of DUSP7 as an RNA Marker for Prognostic Stratification in Acute Myeloid Leukemia: Evidence from Large Population Cohorts |
title_full | Identification of DUSP7 as an RNA Marker for Prognostic Stratification in Acute Myeloid Leukemia: Evidence from Large Population Cohorts |
title_fullStr | Identification of DUSP7 as an RNA Marker for Prognostic Stratification in Acute Myeloid Leukemia: Evidence from Large Population Cohorts |
title_full_unstemmed | Identification of DUSP7 as an RNA Marker for Prognostic Stratification in Acute Myeloid Leukemia: Evidence from Large Population Cohorts |
title_short | Identification of DUSP7 as an RNA Marker for Prognostic Stratification in Acute Myeloid Leukemia: Evidence from Large Population Cohorts |
title_sort | identification of dusp7 as an rna marker for prognostic stratification in acute myeloid leukemia: evidence from large population cohorts |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10396553/ https://www.ncbi.nlm.nih.gov/pubmed/37538139 http://dx.doi.org/10.1155/2023/4348290 |
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