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Identification of DUSP7 as an RNA Marker for Prognostic Stratification in Acute Myeloid Leukemia: Evidence from Large Population Cohorts

BACKGROUND: The problem of prognostic stratification in acute myeloid leukemia (AML) patients still has limitations. METHODS: The expression profile data and clinical features of AML patients were obtained from multiple publicly available sources, including GSE71014, TCGA-LAML, and TARGET-AML. Singl...

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Autor principal: Gao, Xin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Hindawi 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10396553/
https://www.ncbi.nlm.nih.gov/pubmed/37538139
http://dx.doi.org/10.1155/2023/4348290
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author Gao, Xin
author_facet Gao, Xin
author_sort Gao, Xin
collection PubMed
description BACKGROUND: The problem of prognostic stratification in acute myeloid leukemia (AML) patients still has limitations. METHODS: The expression profile data and clinical features of AML patients were obtained from multiple publicly available sources, including GSE71014, TCGA-LAML, and TARGET-AML. Single-cell analysis was performed using the TISCH project. All the analysis was conducted in the R software. RESULTS: In our study, three public AML cohorts, GSE71014, TARGET-AML, and TCGA-AML, were selected. Then, we identified the prognosis-related molecules through bioinformatic analysis. Finally, the DUSP7 was noticed as a risk factor for AML patients, which has not been reported previously. Biological enrichment analysis and immune-related analysis were performed to illustrate the role of DUSP7 in AML. Single-cell analysis indicated that the DUSP7 was widely distributed in various cells, especially in monocyte/macrophages and malignant. Following this, a prognosis model based on DUSP7-derived genes was constructed, which showed a good prognosis prediction ability in all cohorts. CONCLUSIONS: Our results preliminarily reveal the role and potential mechanism of DUSP7 in AML, providing direction for future research.
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spelling pubmed-103965532023-08-03 Identification of DUSP7 as an RNA Marker for Prognostic Stratification in Acute Myeloid Leukemia: Evidence from Large Population Cohorts Gao, Xin Genet Res (Camb) Research Article BACKGROUND: The problem of prognostic stratification in acute myeloid leukemia (AML) patients still has limitations. METHODS: The expression profile data and clinical features of AML patients were obtained from multiple publicly available sources, including GSE71014, TCGA-LAML, and TARGET-AML. Single-cell analysis was performed using the TISCH project. All the analysis was conducted in the R software. RESULTS: In our study, three public AML cohorts, GSE71014, TARGET-AML, and TCGA-AML, were selected. Then, we identified the prognosis-related molecules through bioinformatic analysis. Finally, the DUSP7 was noticed as a risk factor for AML patients, which has not been reported previously. Biological enrichment analysis and immune-related analysis were performed to illustrate the role of DUSP7 in AML. Single-cell analysis indicated that the DUSP7 was widely distributed in various cells, especially in monocyte/macrophages and malignant. Following this, a prognosis model based on DUSP7-derived genes was constructed, which showed a good prognosis prediction ability in all cohorts. CONCLUSIONS: Our results preliminarily reveal the role and potential mechanism of DUSP7 in AML, providing direction for future research. Hindawi 2023-07-26 /pmc/articles/PMC10396553/ /pubmed/37538139 http://dx.doi.org/10.1155/2023/4348290 Text en Copyright © 2023 Xin Gao. https://creativecommons.org/licenses/by/4.0/This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Article
Gao, Xin
Identification of DUSP7 as an RNA Marker for Prognostic Stratification in Acute Myeloid Leukemia: Evidence from Large Population Cohorts
title Identification of DUSP7 as an RNA Marker for Prognostic Stratification in Acute Myeloid Leukemia: Evidence from Large Population Cohorts
title_full Identification of DUSP7 as an RNA Marker for Prognostic Stratification in Acute Myeloid Leukemia: Evidence from Large Population Cohorts
title_fullStr Identification of DUSP7 as an RNA Marker for Prognostic Stratification in Acute Myeloid Leukemia: Evidence from Large Population Cohorts
title_full_unstemmed Identification of DUSP7 as an RNA Marker for Prognostic Stratification in Acute Myeloid Leukemia: Evidence from Large Population Cohorts
title_short Identification of DUSP7 as an RNA Marker for Prognostic Stratification in Acute Myeloid Leukemia: Evidence from Large Population Cohorts
title_sort identification of dusp7 as an rna marker for prognostic stratification in acute myeloid leukemia: evidence from large population cohorts
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10396553/
https://www.ncbi.nlm.nih.gov/pubmed/37538139
http://dx.doi.org/10.1155/2023/4348290
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