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Systematic analyses with genomic and metabolomic insights reveal a new species, Ophiocordyceps indica sp. nov. from treeline area of Indian Western Himalayan region

Ophiocordyceps is a species-rich genus in the order Hypocreales (Sordariomycetes, Ascomycota) depicting a fascinating relationship between microbes and insects. In the present study, a new species, Ophiocordyceps indica sp. nov., is discovered infecting lepidopteran larvae from tree line locations (...

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Autores principales: Sharma, Aakriti, Kaur, Ekjot, Joshi, Robin, Kumari, Pooja, Khatri, Abhishek, Swarnkar, Mohit Kumar, Kumar, Dinesh, Acharya, Vishal, Nadda, Gireesh
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10399244/
https://www.ncbi.nlm.nih.gov/pubmed/37547690
http://dx.doi.org/10.3389/fmicb.2023.1188649
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author Sharma, Aakriti
Kaur, Ekjot
Joshi, Robin
Kumari, Pooja
Khatri, Abhishek
Swarnkar, Mohit Kumar
Kumar, Dinesh
Acharya, Vishal
Nadda, Gireesh
author_facet Sharma, Aakriti
Kaur, Ekjot
Joshi, Robin
Kumari, Pooja
Khatri, Abhishek
Swarnkar, Mohit Kumar
Kumar, Dinesh
Acharya, Vishal
Nadda, Gireesh
author_sort Sharma, Aakriti
collection PubMed
description Ophiocordyceps is a species-rich genus in the order Hypocreales (Sordariomycetes, Ascomycota) depicting a fascinating relationship between microbes and insects. In the present study, a new species, Ophiocordyceps indica sp. nov., is discovered infecting lepidopteran larvae from tree line locations (2,202–2,653 m AMSL) of the Kullu District, Himachal Pradesh, Indian Western Himalayan region, using combinations of morphological and molecular phylogenetic analyses. A phylogeny for Ophiocordyceps based on a combined multigene (nrSSU, nrLSU, tef-1α, and RPB1) dataset is provided, and its taxonomic status within Ophiocordycipitaceae is briefly discussed. Its genome size (~59 Mb) revealed 94% genetic similarity with O. sinensis; however, it differs from other extant Ophiocordyceps species based on morphological characteristics, molecular phylogenetic relationships, and genetic distance. O. indica is identified as the second homothallic species in the family Ophiocordycipitaceae, after O. sinensis. The presence of targeted marker components, viz. nucleosides (2,303.25 μg/g), amino acids (6.15%), mannitol (10.13%), and biological activity data, suggests it to be a new potential source of nutraceutical importance. Data generated around this economically important species will expand our understanding regarding the diversity of Ophiocordyceps-like taxa from new locations, thus providing new research avenues.
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spelling pubmed-103992442023-08-04 Systematic analyses with genomic and metabolomic insights reveal a new species, Ophiocordyceps indica sp. nov. from treeline area of Indian Western Himalayan region Sharma, Aakriti Kaur, Ekjot Joshi, Robin Kumari, Pooja Khatri, Abhishek Swarnkar, Mohit Kumar Kumar, Dinesh Acharya, Vishal Nadda, Gireesh Front Microbiol Microbiology Ophiocordyceps is a species-rich genus in the order Hypocreales (Sordariomycetes, Ascomycota) depicting a fascinating relationship between microbes and insects. In the present study, a new species, Ophiocordyceps indica sp. nov., is discovered infecting lepidopteran larvae from tree line locations (2,202–2,653 m AMSL) of the Kullu District, Himachal Pradesh, Indian Western Himalayan region, using combinations of morphological and molecular phylogenetic analyses. A phylogeny for Ophiocordyceps based on a combined multigene (nrSSU, nrLSU, tef-1α, and RPB1) dataset is provided, and its taxonomic status within Ophiocordycipitaceae is briefly discussed. Its genome size (~59 Mb) revealed 94% genetic similarity with O. sinensis; however, it differs from other extant Ophiocordyceps species based on morphological characteristics, molecular phylogenetic relationships, and genetic distance. O. indica is identified as the second homothallic species in the family Ophiocordycipitaceae, after O. sinensis. The presence of targeted marker components, viz. nucleosides (2,303.25 μg/g), amino acids (6.15%), mannitol (10.13%), and biological activity data, suggests it to be a new potential source of nutraceutical importance. Data generated around this economically important species will expand our understanding regarding the diversity of Ophiocordyceps-like taxa from new locations, thus providing new research avenues. Frontiers Media S.A. 2023-07-20 /pmc/articles/PMC10399244/ /pubmed/37547690 http://dx.doi.org/10.3389/fmicb.2023.1188649 Text en Copyright © 2023 Sharma, Kaur, Joshi, Kumari, Khatri, Swarnkar, Kumar, Acharya and Nadda. https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Sharma, Aakriti
Kaur, Ekjot
Joshi, Robin
Kumari, Pooja
Khatri, Abhishek
Swarnkar, Mohit Kumar
Kumar, Dinesh
Acharya, Vishal
Nadda, Gireesh
Systematic analyses with genomic and metabolomic insights reveal a new species, Ophiocordyceps indica sp. nov. from treeline area of Indian Western Himalayan region
title Systematic analyses with genomic and metabolomic insights reveal a new species, Ophiocordyceps indica sp. nov. from treeline area of Indian Western Himalayan region
title_full Systematic analyses with genomic and metabolomic insights reveal a new species, Ophiocordyceps indica sp. nov. from treeline area of Indian Western Himalayan region
title_fullStr Systematic analyses with genomic and metabolomic insights reveal a new species, Ophiocordyceps indica sp. nov. from treeline area of Indian Western Himalayan region
title_full_unstemmed Systematic analyses with genomic and metabolomic insights reveal a new species, Ophiocordyceps indica sp. nov. from treeline area of Indian Western Himalayan region
title_short Systematic analyses with genomic and metabolomic insights reveal a new species, Ophiocordyceps indica sp. nov. from treeline area of Indian Western Himalayan region
title_sort systematic analyses with genomic and metabolomic insights reveal a new species, ophiocordyceps indica sp. nov. from treeline area of indian western himalayan region
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10399244/
https://www.ncbi.nlm.nih.gov/pubmed/37547690
http://dx.doi.org/10.3389/fmicb.2023.1188649
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