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Cuproptosis-related gene expression is associated with immune infiltration and CD47/CD24 expression in glioblastoma, and a risk score based on these genes can predict the survival and prognosis of patients
INTRODUCTION: Glioblastoma (GBM) is the most invasive type of glioma, is insensitive to radiotherapy and chemotherapy, and has high proliferation and invasive ability, with a 5-year survival rate of <5%. Cuproptosis-related genes (CRGs) have been successfully used to predict the prognosis of many...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Frontiers Media S.A.
2023
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Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10399623/ https://www.ncbi.nlm.nih.gov/pubmed/37546426 http://dx.doi.org/10.3389/fonc.2023.1011476 |
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author | Li, Erliang Qiao, Huanhuan Sun, Jin Ma, Qiong Lin, Li He, Yixiang Li, Shuang Mao, Xinggang Zhang, Xiaoping Liao, Bo |
author_facet | Li, Erliang Qiao, Huanhuan Sun, Jin Ma, Qiong Lin, Li He, Yixiang Li, Shuang Mao, Xinggang Zhang, Xiaoping Liao, Bo |
author_sort | Li, Erliang |
collection | PubMed |
description | INTRODUCTION: Glioblastoma (GBM) is the most invasive type of glioma, is insensitive to radiotherapy and chemotherapy, and has high proliferation and invasive ability, with a 5-year survival rate of <5%. Cuproptosis-related genes (CRGs) have been successfully used to predict the prognosis of many types of tumors. However, the relationship between cuproptosis and GBM remains unclear. METHODS: Here, we sought to identify CRGs in GBM and elucidate their role in the tumor immune microenvironment and prognosis. To that aim, changes in CRGs in The Cancer Genome Atlas (TCGA) transcriptional and Gene Expression Omnibus (GEO) datasets (GEO4290 and GEO15824) were characterized, and the expression patterns of these genes were analyzed. RESULTS: A risk score based on CRG expression characteristics could predict the survival and prognosis of patients with GBM and was significantly associated with immune infiltration levels and the expression of CD47 and CD24, which are immune checkpoints of the “don't eat me “signal. Furthermore, we found that the CDKN2A gene may predict GBM sensitivity and resistance to drugs. DISCUSSION: Our findings suggest that CRGs play a crucial role in GBM outcomes and provide new insights into CRG-related target drugs/molecules for cancer prevention and treatment. |
format | Online Article Text |
id | pubmed-10399623 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Frontiers Media S.A. |
record_format | MEDLINE/PubMed |
spelling | pubmed-103996232023-08-04 Cuproptosis-related gene expression is associated with immune infiltration and CD47/CD24 expression in glioblastoma, and a risk score based on these genes can predict the survival and prognosis of patients Li, Erliang Qiao, Huanhuan Sun, Jin Ma, Qiong Lin, Li He, Yixiang Li, Shuang Mao, Xinggang Zhang, Xiaoping Liao, Bo Front Oncol Oncology INTRODUCTION: Glioblastoma (GBM) is the most invasive type of glioma, is insensitive to radiotherapy and chemotherapy, and has high proliferation and invasive ability, with a 5-year survival rate of <5%. Cuproptosis-related genes (CRGs) have been successfully used to predict the prognosis of many types of tumors. However, the relationship between cuproptosis and GBM remains unclear. METHODS: Here, we sought to identify CRGs in GBM and elucidate their role in the tumor immune microenvironment and prognosis. To that aim, changes in CRGs in The Cancer Genome Atlas (TCGA) transcriptional and Gene Expression Omnibus (GEO) datasets (GEO4290 and GEO15824) were characterized, and the expression patterns of these genes were analyzed. RESULTS: A risk score based on CRG expression characteristics could predict the survival and prognosis of patients with GBM and was significantly associated with immune infiltration levels and the expression of CD47 and CD24, which are immune checkpoints of the “don't eat me “signal. Furthermore, we found that the CDKN2A gene may predict GBM sensitivity and resistance to drugs. DISCUSSION: Our findings suggest that CRGs play a crucial role in GBM outcomes and provide new insights into CRG-related target drugs/molecules for cancer prevention and treatment. Frontiers Media S.A. 2023-07-20 /pmc/articles/PMC10399623/ /pubmed/37546426 http://dx.doi.org/10.3389/fonc.2023.1011476 Text en Copyright © 2023 Li, Qiao, Sun, Ma, Lin, He, Li, Mao, Zhang and Liao https://creativecommons.org/licenses/by/4.0/This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms. |
spellingShingle | Oncology Li, Erliang Qiao, Huanhuan Sun, Jin Ma, Qiong Lin, Li He, Yixiang Li, Shuang Mao, Xinggang Zhang, Xiaoping Liao, Bo Cuproptosis-related gene expression is associated with immune infiltration and CD47/CD24 expression in glioblastoma, and a risk score based on these genes can predict the survival and prognosis of patients |
title | Cuproptosis-related gene expression is associated with immune infiltration and CD47/CD24 expression in glioblastoma, and a risk score based on these genes can predict the survival and prognosis of patients |
title_full | Cuproptosis-related gene expression is associated with immune infiltration and CD47/CD24 expression in glioblastoma, and a risk score based on these genes can predict the survival and prognosis of patients |
title_fullStr | Cuproptosis-related gene expression is associated with immune infiltration and CD47/CD24 expression in glioblastoma, and a risk score based on these genes can predict the survival and prognosis of patients |
title_full_unstemmed | Cuproptosis-related gene expression is associated with immune infiltration and CD47/CD24 expression in glioblastoma, and a risk score based on these genes can predict the survival and prognosis of patients |
title_short | Cuproptosis-related gene expression is associated with immune infiltration and CD47/CD24 expression in glioblastoma, and a risk score based on these genes can predict the survival and prognosis of patients |
title_sort | cuproptosis-related gene expression is associated with immune infiltration and cd47/cd24 expression in glioblastoma, and a risk score based on these genes can predict the survival and prognosis of patients |
topic | Oncology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10399623/ https://www.ncbi.nlm.nih.gov/pubmed/37546426 http://dx.doi.org/10.3389/fonc.2023.1011476 |
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