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Construction of PANoptosis signature: Novel target discovery for prostate cancer immunotherapy

PANoptosis pathway gene sets encompassing pyroptosis, apoptosis, and necroptosis were identified from the MSigDB database. We analyzed the perturbations and crosstalk in the PANoptosis pathway in prostate adenocarcinoma (PRAD), including gene mutation, transcription, methylation, and clinical featur...

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Autores principales: Yi, Xianyanling, Li, Jin, Zheng, Xiaonan, Xu, Hang, Liao, Dazhou, Zhang, Tianyi, Wei, Qiang, Li, Hong, Peng, Jiajie, Ai, Jianzhong
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Society of Gene & Cell Therapy 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10400972/
https://www.ncbi.nlm.nih.gov/pubmed/37547288
http://dx.doi.org/10.1016/j.omtn.2023.07.010
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author Yi, Xianyanling
Li, Jin
Zheng, Xiaonan
Xu, Hang
Liao, Dazhou
Zhang, Tianyi
Wei, Qiang
Li, Hong
Peng, Jiajie
Ai, Jianzhong
author_facet Yi, Xianyanling
Li, Jin
Zheng, Xiaonan
Xu, Hang
Liao, Dazhou
Zhang, Tianyi
Wei, Qiang
Li, Hong
Peng, Jiajie
Ai, Jianzhong
author_sort Yi, Xianyanling
collection PubMed
description PANoptosis pathway gene sets encompassing pyroptosis, apoptosis, and necroptosis were identified from the MSigDB database. We analyzed the perturbations and crosstalk in the PANoptosis pathway in prostate adenocarcinoma (PRAD), including gene mutation, transcription, methylation, and clinical features. By constructing a PANoptosis signature, we accurately predicted the prognosis and immunotherapeutic response of PRAD patients. We further explored the molecular features and immunological roles of the signature, dividing patients into high- and low-score groups. Notably, the high-score group correlated with better survival outcomes and immunotherapeutic responses, as well as a higher mutation frequency and enrichment score in the PANoptosis and HALLMARK pathways. The PANoptosis signature also enhanced overall antitumor immunity, promoted immune cell infiltration, upregulated immune checkpoint regulators, and revealed the cold tumor characteristics of PRAD. We also identified potential drug targets based on the PANoptosis signature. These findings lead the way in identifying novel prognostic markers and therapeutic targets for patients with PRAD.
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spelling pubmed-104009722023-08-05 Construction of PANoptosis signature: Novel target discovery for prostate cancer immunotherapy Yi, Xianyanling Li, Jin Zheng, Xiaonan Xu, Hang Liao, Dazhou Zhang, Tianyi Wei, Qiang Li, Hong Peng, Jiajie Ai, Jianzhong Mol Ther Nucleic Acids Original Article PANoptosis pathway gene sets encompassing pyroptosis, apoptosis, and necroptosis were identified from the MSigDB database. We analyzed the perturbations and crosstalk in the PANoptosis pathway in prostate adenocarcinoma (PRAD), including gene mutation, transcription, methylation, and clinical features. By constructing a PANoptosis signature, we accurately predicted the prognosis and immunotherapeutic response of PRAD patients. We further explored the molecular features and immunological roles of the signature, dividing patients into high- and low-score groups. Notably, the high-score group correlated with better survival outcomes and immunotherapeutic responses, as well as a higher mutation frequency and enrichment score in the PANoptosis and HALLMARK pathways. The PANoptosis signature also enhanced overall antitumor immunity, promoted immune cell infiltration, upregulated immune checkpoint regulators, and revealed the cold tumor characteristics of PRAD. We also identified potential drug targets based on the PANoptosis signature. These findings lead the way in identifying novel prognostic markers and therapeutic targets for patients with PRAD. American Society of Gene & Cell Therapy 2023-07-15 /pmc/articles/PMC10400972/ /pubmed/37547288 http://dx.doi.org/10.1016/j.omtn.2023.07.010 Text en © 2023 The Author(s) https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Original Article
Yi, Xianyanling
Li, Jin
Zheng, Xiaonan
Xu, Hang
Liao, Dazhou
Zhang, Tianyi
Wei, Qiang
Li, Hong
Peng, Jiajie
Ai, Jianzhong
Construction of PANoptosis signature: Novel target discovery for prostate cancer immunotherapy
title Construction of PANoptosis signature: Novel target discovery for prostate cancer immunotherapy
title_full Construction of PANoptosis signature: Novel target discovery for prostate cancer immunotherapy
title_fullStr Construction of PANoptosis signature: Novel target discovery for prostate cancer immunotherapy
title_full_unstemmed Construction of PANoptosis signature: Novel target discovery for prostate cancer immunotherapy
title_short Construction of PANoptosis signature: Novel target discovery for prostate cancer immunotherapy
title_sort construction of panoptosis signature: novel target discovery for prostate cancer immunotherapy
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10400972/
https://www.ncbi.nlm.nih.gov/pubmed/37547288
http://dx.doi.org/10.1016/j.omtn.2023.07.010
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