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Construction of PANoptosis signature: Novel target discovery for prostate cancer immunotherapy
PANoptosis pathway gene sets encompassing pyroptosis, apoptosis, and necroptosis were identified from the MSigDB database. We analyzed the perturbations and crosstalk in the PANoptosis pathway in prostate adenocarcinoma (PRAD), including gene mutation, transcription, methylation, and clinical featur...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
American Society of Gene & Cell Therapy
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10400972/ https://www.ncbi.nlm.nih.gov/pubmed/37547288 http://dx.doi.org/10.1016/j.omtn.2023.07.010 |
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author | Yi, Xianyanling Li, Jin Zheng, Xiaonan Xu, Hang Liao, Dazhou Zhang, Tianyi Wei, Qiang Li, Hong Peng, Jiajie Ai, Jianzhong |
author_facet | Yi, Xianyanling Li, Jin Zheng, Xiaonan Xu, Hang Liao, Dazhou Zhang, Tianyi Wei, Qiang Li, Hong Peng, Jiajie Ai, Jianzhong |
author_sort | Yi, Xianyanling |
collection | PubMed |
description | PANoptosis pathway gene sets encompassing pyroptosis, apoptosis, and necroptosis were identified from the MSigDB database. We analyzed the perturbations and crosstalk in the PANoptosis pathway in prostate adenocarcinoma (PRAD), including gene mutation, transcription, methylation, and clinical features. By constructing a PANoptosis signature, we accurately predicted the prognosis and immunotherapeutic response of PRAD patients. We further explored the molecular features and immunological roles of the signature, dividing patients into high- and low-score groups. Notably, the high-score group correlated with better survival outcomes and immunotherapeutic responses, as well as a higher mutation frequency and enrichment score in the PANoptosis and HALLMARK pathways. The PANoptosis signature also enhanced overall antitumor immunity, promoted immune cell infiltration, upregulated immune checkpoint regulators, and revealed the cold tumor characteristics of PRAD. We also identified potential drug targets based on the PANoptosis signature. These findings lead the way in identifying novel prognostic markers and therapeutic targets for patients with PRAD. |
format | Online Article Text |
id | pubmed-10400972 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | American Society of Gene & Cell Therapy |
record_format | MEDLINE/PubMed |
spelling | pubmed-104009722023-08-05 Construction of PANoptosis signature: Novel target discovery for prostate cancer immunotherapy Yi, Xianyanling Li, Jin Zheng, Xiaonan Xu, Hang Liao, Dazhou Zhang, Tianyi Wei, Qiang Li, Hong Peng, Jiajie Ai, Jianzhong Mol Ther Nucleic Acids Original Article PANoptosis pathway gene sets encompassing pyroptosis, apoptosis, and necroptosis were identified from the MSigDB database. We analyzed the perturbations and crosstalk in the PANoptosis pathway in prostate adenocarcinoma (PRAD), including gene mutation, transcription, methylation, and clinical features. By constructing a PANoptosis signature, we accurately predicted the prognosis and immunotherapeutic response of PRAD patients. We further explored the molecular features and immunological roles of the signature, dividing patients into high- and low-score groups. Notably, the high-score group correlated with better survival outcomes and immunotherapeutic responses, as well as a higher mutation frequency and enrichment score in the PANoptosis and HALLMARK pathways. The PANoptosis signature also enhanced overall antitumor immunity, promoted immune cell infiltration, upregulated immune checkpoint regulators, and revealed the cold tumor characteristics of PRAD. We also identified potential drug targets based on the PANoptosis signature. These findings lead the way in identifying novel prognostic markers and therapeutic targets for patients with PRAD. American Society of Gene & Cell Therapy 2023-07-15 /pmc/articles/PMC10400972/ /pubmed/37547288 http://dx.doi.org/10.1016/j.omtn.2023.07.010 Text en © 2023 The Author(s) https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Original Article Yi, Xianyanling Li, Jin Zheng, Xiaonan Xu, Hang Liao, Dazhou Zhang, Tianyi Wei, Qiang Li, Hong Peng, Jiajie Ai, Jianzhong Construction of PANoptosis signature: Novel target discovery for prostate cancer immunotherapy |
title | Construction of PANoptosis signature: Novel target discovery for prostate cancer immunotherapy |
title_full | Construction of PANoptosis signature: Novel target discovery for prostate cancer immunotherapy |
title_fullStr | Construction of PANoptosis signature: Novel target discovery for prostate cancer immunotherapy |
title_full_unstemmed | Construction of PANoptosis signature: Novel target discovery for prostate cancer immunotherapy |
title_short | Construction of PANoptosis signature: Novel target discovery for prostate cancer immunotherapy |
title_sort | construction of panoptosis signature: novel target discovery for prostate cancer immunotherapy |
topic | Original Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10400972/ https://www.ncbi.nlm.nih.gov/pubmed/37547288 http://dx.doi.org/10.1016/j.omtn.2023.07.010 |
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