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Conservation implications of elucidating the Korean wolf taxonomic ambiguity through whole‐genome sequencing

The taxonomic status of the now likely extirpated Korean Peninsula wolf has been extensively debated, with some arguing it represents an independent wolf lineage, Canis coreanus. To investigate the Korean wolf's genetic affiliations and taxonomic status, we sequenced and analysed the genomes of...

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Autores principales: Hernández‐Alonso, Germán, Ramos‐Madrigal, Jazmín, Sun, Xin, Scharff‐Olsen, Camilla Hjorth, Sinding, Mikkel‐Holger S., Martins, Nuno F., Ciucani, Marta Maria, Mak, Sarah S. T., Lanigan, Liam Thomas, Clausen, Cecilie G., Bhak, Jong, Jeon, Sungwon, Kim, Changjae, Eo, Kyung Yeon, Cho, Seong‐Ho, Boldgiv, Bazartseren, Gantulga, Gankhuyag, Unudbayasgalan, Zunduibaatar, Kosintsev, Pavel A., Stenøien, Hans K., Gilbert, M. Thomas P., Gopalakrishnan, Shyam
Formato: Online Artículo Texto
Lenguaje:English
Publicado: John Wiley and Sons Inc. 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10401669/
https://www.ncbi.nlm.nih.gov/pubmed/37546572
http://dx.doi.org/10.1002/ece3.10404
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author Hernández‐Alonso, Germán
Ramos‐Madrigal, Jazmín
Sun, Xin
Scharff‐Olsen, Camilla Hjorth
Sinding, Mikkel‐Holger S.
Martins, Nuno F.
Ciucani, Marta Maria
Mak, Sarah S. T.
Lanigan, Liam Thomas
Clausen, Cecilie G.
Bhak, Jong
Jeon, Sungwon
Kim, Changjae
Eo, Kyung Yeon
Cho, Seong‐Ho
Boldgiv, Bazartseren
Gantulga, Gankhuyag
Unudbayasgalan, Zunduibaatar
Kosintsev, Pavel A.
Stenøien, Hans K.
Gilbert, M. Thomas P.
Gopalakrishnan, Shyam
author_facet Hernández‐Alonso, Germán
Ramos‐Madrigal, Jazmín
Sun, Xin
Scharff‐Olsen, Camilla Hjorth
Sinding, Mikkel‐Holger S.
Martins, Nuno F.
Ciucani, Marta Maria
Mak, Sarah S. T.
Lanigan, Liam Thomas
Clausen, Cecilie G.
Bhak, Jong
Jeon, Sungwon
Kim, Changjae
Eo, Kyung Yeon
Cho, Seong‐Ho
Boldgiv, Bazartseren
Gantulga, Gankhuyag
Unudbayasgalan, Zunduibaatar
Kosintsev, Pavel A.
Stenøien, Hans K.
Gilbert, M. Thomas P.
Gopalakrishnan, Shyam
author_sort Hernández‐Alonso, Germán
collection PubMed
description The taxonomic status of the now likely extirpated Korean Peninsula wolf has been extensively debated, with some arguing it represents an independent wolf lineage, Canis coreanus. To investigate the Korean wolf's genetic affiliations and taxonomic status, we sequenced and analysed the genomes of a Korean wolf dated to the beginning of the 20th century, and a captive wolf originally from the Pyongyang Central Zoo. Our results indicated that the Korean wolf bears similar genetic ancestry to other regional East Asian populations, therefore suggesting it is not a distinct taxonomic lineage. We identified regional patterns of wolf population structure and admixture in East Asia with potential conservation consequences in the Korean Peninsula and on a regional scale. We find that the Korean wolf has similar genomic diversity and inbreeding to other East Asian wolves. Finally, we show that, in contrast to the historical sample, the captive wolf is genetically more similar to wolves from the Tibetan Plateau; hence, Korean wolf conservation programmes might not benefit from the inclusion of this specimen.
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spelling pubmed-104016692023-08-05 Conservation implications of elucidating the Korean wolf taxonomic ambiguity through whole‐genome sequencing Hernández‐Alonso, Germán Ramos‐Madrigal, Jazmín Sun, Xin Scharff‐Olsen, Camilla Hjorth Sinding, Mikkel‐Holger S. Martins, Nuno F. Ciucani, Marta Maria Mak, Sarah S. T. Lanigan, Liam Thomas Clausen, Cecilie G. Bhak, Jong Jeon, Sungwon Kim, Changjae Eo, Kyung Yeon Cho, Seong‐Ho Boldgiv, Bazartseren Gantulga, Gankhuyag Unudbayasgalan, Zunduibaatar Kosintsev, Pavel A. Stenøien, Hans K. Gilbert, M. Thomas P. Gopalakrishnan, Shyam Ecol Evol Research Articles The taxonomic status of the now likely extirpated Korean Peninsula wolf has been extensively debated, with some arguing it represents an independent wolf lineage, Canis coreanus. To investigate the Korean wolf's genetic affiliations and taxonomic status, we sequenced and analysed the genomes of a Korean wolf dated to the beginning of the 20th century, and a captive wolf originally from the Pyongyang Central Zoo. Our results indicated that the Korean wolf bears similar genetic ancestry to other regional East Asian populations, therefore suggesting it is not a distinct taxonomic lineage. We identified regional patterns of wolf population structure and admixture in East Asia with potential conservation consequences in the Korean Peninsula and on a regional scale. We find that the Korean wolf has similar genomic diversity and inbreeding to other East Asian wolves. Finally, we show that, in contrast to the historical sample, the captive wolf is genetically more similar to wolves from the Tibetan Plateau; hence, Korean wolf conservation programmes might not benefit from the inclusion of this specimen. John Wiley and Sons Inc. 2023-08-04 /pmc/articles/PMC10401669/ /pubmed/37546572 http://dx.doi.org/10.1002/ece3.10404 Text en © 2023 The Authors. Ecology and Evolution published by John Wiley & Sons Ltd. https://creativecommons.org/licenses/by/4.0/This is an open access article under the terms of the http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) License, which permits use, distribution and reproduction in any medium, provided the original work is properly cited.
spellingShingle Research Articles
Hernández‐Alonso, Germán
Ramos‐Madrigal, Jazmín
Sun, Xin
Scharff‐Olsen, Camilla Hjorth
Sinding, Mikkel‐Holger S.
Martins, Nuno F.
Ciucani, Marta Maria
Mak, Sarah S. T.
Lanigan, Liam Thomas
Clausen, Cecilie G.
Bhak, Jong
Jeon, Sungwon
Kim, Changjae
Eo, Kyung Yeon
Cho, Seong‐Ho
Boldgiv, Bazartseren
Gantulga, Gankhuyag
Unudbayasgalan, Zunduibaatar
Kosintsev, Pavel A.
Stenøien, Hans K.
Gilbert, M. Thomas P.
Gopalakrishnan, Shyam
Conservation implications of elucidating the Korean wolf taxonomic ambiguity through whole‐genome sequencing
title Conservation implications of elucidating the Korean wolf taxonomic ambiguity through whole‐genome sequencing
title_full Conservation implications of elucidating the Korean wolf taxonomic ambiguity through whole‐genome sequencing
title_fullStr Conservation implications of elucidating the Korean wolf taxonomic ambiguity through whole‐genome sequencing
title_full_unstemmed Conservation implications of elucidating the Korean wolf taxonomic ambiguity through whole‐genome sequencing
title_short Conservation implications of elucidating the Korean wolf taxonomic ambiguity through whole‐genome sequencing
title_sort conservation implications of elucidating the korean wolf taxonomic ambiguity through whole‐genome sequencing
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10401669/
https://www.ncbi.nlm.nih.gov/pubmed/37546572
http://dx.doi.org/10.1002/ece3.10404
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