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Network approach in liquidomics landscape

Tissue-based biopsy is the present main tool to explore the molecular landscape of cancer, but it also has many limits to be frequently executed, being too invasive with the risk of side effects. These limits and the ability of cancer to constantly evolve its genomic profile, have recently led to th...

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Autores principales: Santini, Daniele, Botticelli, Andrea, Galvano, Antonio, Iuliani, Michele, Incorvaia, Lorena, Gristina, Valerio, Taffon, Chiara, Foderaro, Simone, Paccagnella, Elisa, Simonetti, Sonia, Fazio, Federico, Scagnoli, Simone, Pomati, Giulia, Pantano, Francesco, Perrone, Giuseppe, De Falco, Elena, Russo, Antonio, Spinelli, Gian Paolo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: BioMed Central 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10401883/
https://www.ncbi.nlm.nih.gov/pubmed/37542343
http://dx.doi.org/10.1186/s13046-023-02743-9
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author Santini, Daniele
Botticelli, Andrea
Galvano, Antonio
Iuliani, Michele
Incorvaia, Lorena
Gristina, Valerio
Taffon, Chiara
Foderaro, Simone
Paccagnella, Elisa
Simonetti, Sonia
Fazio, Federico
Scagnoli, Simone
Pomati, Giulia
Pantano, Francesco
Perrone, Giuseppe
De Falco, Elena
Russo, Antonio
Spinelli, Gian Paolo
author_facet Santini, Daniele
Botticelli, Andrea
Galvano, Antonio
Iuliani, Michele
Incorvaia, Lorena
Gristina, Valerio
Taffon, Chiara
Foderaro, Simone
Paccagnella, Elisa
Simonetti, Sonia
Fazio, Federico
Scagnoli, Simone
Pomati, Giulia
Pantano, Francesco
Perrone, Giuseppe
De Falco, Elena
Russo, Antonio
Spinelli, Gian Paolo
author_sort Santini, Daniele
collection PubMed
description Tissue-based biopsy is the present main tool to explore the molecular landscape of cancer, but it also has many limits to be frequently executed, being too invasive with the risk of side effects. These limits and the ability of cancer to constantly evolve its genomic profile, have recently led to the need of a less invasive and more accurate alternative, such as liquid biopsy. By searching Circulating Tumor Cells and residues of their nucleic acids or other tumor products in body fluids, especially in blood, but also in urine, stools and saliva, liquid biopsy is becoming the future of clinical oncology. Despite the current lack of a standardization for its workflows, that makes it hard to be reproduced, liquid biopsy has already obtained promising results for cancer screening, diagnosis, prognosis, and risk of recurrence. Through a more accessible molecular profiling of tumors, it could become easier to identify biomarkers predictive of response to treatment, such as EGFR mutations in non-small cell lung cancer and KRAS mutations in colorectal cancer, or Microsatellite Instability and Mismatch Repair as predictive markers of pembrolizumab response. By monitoring circulating tumor DNA in longitudinal repeated sampling of blood we could also predict Minimal Residual Disease and the risk of recurrence in already radically resected patients. In this review we will discuss about the current knowledge of limitations and strengths of the different forms of liquid biopsies for its inclusion in normal cancer management, with a brief nod to their newest biomarkers and its future implications.
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spelling pubmed-104018832023-08-05 Network approach in liquidomics landscape Santini, Daniele Botticelli, Andrea Galvano, Antonio Iuliani, Michele Incorvaia, Lorena Gristina, Valerio Taffon, Chiara Foderaro, Simone Paccagnella, Elisa Simonetti, Sonia Fazio, Federico Scagnoli, Simone Pomati, Giulia Pantano, Francesco Perrone, Giuseppe De Falco, Elena Russo, Antonio Spinelli, Gian Paolo J Exp Clin Cancer Res Review Tissue-based biopsy is the present main tool to explore the molecular landscape of cancer, but it also has many limits to be frequently executed, being too invasive with the risk of side effects. These limits and the ability of cancer to constantly evolve its genomic profile, have recently led to the need of a less invasive and more accurate alternative, such as liquid biopsy. By searching Circulating Tumor Cells and residues of their nucleic acids or other tumor products in body fluids, especially in blood, but also in urine, stools and saliva, liquid biopsy is becoming the future of clinical oncology. Despite the current lack of a standardization for its workflows, that makes it hard to be reproduced, liquid biopsy has already obtained promising results for cancer screening, diagnosis, prognosis, and risk of recurrence. Through a more accessible molecular profiling of tumors, it could become easier to identify biomarkers predictive of response to treatment, such as EGFR mutations in non-small cell lung cancer and KRAS mutations in colorectal cancer, or Microsatellite Instability and Mismatch Repair as predictive markers of pembrolizumab response. By monitoring circulating tumor DNA in longitudinal repeated sampling of blood we could also predict Minimal Residual Disease and the risk of recurrence in already radically resected patients. In this review we will discuss about the current knowledge of limitations and strengths of the different forms of liquid biopsies for its inclusion in normal cancer management, with a brief nod to their newest biomarkers and its future implications. BioMed Central 2023-08-04 /pmc/articles/PMC10401883/ /pubmed/37542343 http://dx.doi.org/10.1186/s13046-023-02743-9 Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) . The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/ (https://creativecommons.org/publicdomain/zero/1.0/) ) applies to the data made available in this article, unless otherwise stated in a credit line to the data.
spellingShingle Review
Santini, Daniele
Botticelli, Andrea
Galvano, Antonio
Iuliani, Michele
Incorvaia, Lorena
Gristina, Valerio
Taffon, Chiara
Foderaro, Simone
Paccagnella, Elisa
Simonetti, Sonia
Fazio, Federico
Scagnoli, Simone
Pomati, Giulia
Pantano, Francesco
Perrone, Giuseppe
De Falco, Elena
Russo, Antonio
Spinelli, Gian Paolo
Network approach in liquidomics landscape
title Network approach in liquidomics landscape
title_full Network approach in liquidomics landscape
title_fullStr Network approach in liquidomics landscape
title_full_unstemmed Network approach in liquidomics landscape
title_short Network approach in liquidomics landscape
title_sort network approach in liquidomics landscape
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10401883/
https://www.ncbi.nlm.nih.gov/pubmed/37542343
http://dx.doi.org/10.1186/s13046-023-02743-9
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