Cargando…

Genome-scale chromatin interaction dynamic measurements for key components of the RNA Pol II general transcription machinery

BACKGROUND: A great deal of work has revealed in structural detail the components of the machinery responsible for mRNA gene transcription initiation. These include the general transcription factors (GTFs), which assemble at promoters along with RNA Polymerase II (Pol II) to form a preinitiation com...

Descripción completa

Detalles Bibliográficos
Autores principales:	Kupkova, Kristyna, Shetty, Savera J., Hoffman, Elizabeth A., Bekiranov, Stefan, Auble, David T.
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	Cold Spring Harbor Laboratory 2023
Materias:	Article
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10402067/ https://www.ncbi.nlm.nih.gov/pubmed/37546819 http://dx.doi.org/10.1101/2023.07.25.550532

Ejemplares similares

Histone H3 lysine 27 acetylation profile undergoes two global shifts in undernourished children and suggests altered one-carbon metabolism
por: Kupkova, Kristyna, et al.
Publicado: (2021)

Globally elevated levels of histone H3 lysine 9 trimethylation in early infancy are associated with poor growth trajectory in Bangladeshi children
por: Kupkova, Kristyna, et al.
Publicado: (2023)

Chromatin remodeling by Pol II primes efficient Pol III transcription
por: Yague-Sanz, Carlo, et al.
Publicado: (2023)

RNA synthesis is associated with multiple TBP-chromatin binding events
por: Zaidi, Hussain A., et al.
Publicado: (2017)

Histone H3 lysine 4 methylation signature associated with human undernutrition
por: Uchiyama, Robin, et al.
Publicado: (2018)

Self-assembly of promoter DNA and RNA Pol II machinery into transcriptionally active biomolecular condensates
por: Lewis, Brian A., et al.
Publicado: (2023)

Genome-wide analyses of chromatin interactions after the loss of Pol I, Pol II, and Pol III
por: Jiang, Yongpeng, et al.
Publicado: (2020)

RNA-dependent chromatin association of transcription elongation factors and Pol II CTD kinases
por: Battaglia, Sofia, et al.
Publicado: (2017)

PTEN interacts with the transcription machinery on chromatin and regulates RNA polymerase II-mediated transcription
por: Steinbach, Nicole, et al.
Publicado: (2019)

Enhancer SINEs Link Pol III to Pol II Transcription in Neurons
por: Policarpi, Cristina, et al.
Publicado: (2017)

Transcriptional Profile of Exercise-Induced Protection Against Relapse to Cocaine Seeking in a Rat Model
por: Towers, Eleanor Blair, et al.
Publicado: (2023)

Therapeutic Targeting of the General RNA Polymerase II Transcription Machinery
por: Martin, Ryan D., et al.
Publicado: (2020)

Genome-wide interplay between chromatin and the transcription machinery
por: Pugh, B Franklin
Publicado: (2013)

Spatially coherent diffusion of human RNA Pol II depends on transcriptional state rather than chromatin motion
por: Barth, Roman, et al.
Publicado: (2022)

Evidence that Mediator is essential for Pol II transcription, but is not a required component of the preinitiation complex in vivo
por: Petrenko, Natalia, et al.
Publicado: (2017)

Crystal structure of the full Swi2/Snf2 remodeler Mot1 in the resting state
por: Butryn, Agata, et al.
Publicado: (2018)

Genomic binding of Pol III transcription machinery and relationship with TFIIS transcription factor distribution in mouse embryonic stem cells
por: Carrière, Lucie, et al.
Publicado: (2012)

Correction: Evidence that Mediator is essential for Pol II transcription, but is not a required component of the preinitiation complex in vivo
por: Petrenko, Natalia, et al.
Publicado: (2017)

Structure of paused transcription complex Pol II-DSIF-NELF
por: Vos, Seychelle M., et al.
Publicado: (2018)

Topoisomerase II is required for the production of long Pol II gene transcripts in yeast
por: Joshi, Ricky S., et al.
Publicado: (2012)

Transcriptomes of six mutants in the Sen1 pathway reveal combinatorial control of transcription termination across the Saccharomyces cerevisiae genome
por: Chen, Xin, et al.
Publicado: (2017)

Chromatin loop anchors contain core structural components of the gene expression machinery in maize
por: Deschamps, Stéphane, et al.
Publicado: (2021)

RNA Pol II Promotes Transcription of Centromeric Satellite DNA in Beetles
por: Pezer, Željka, et al.
Publicado: (2008)

CTD-dependent and -independent mechanisms govern co-transcriptional capping of Pol II transcripts
por: Noe Gonzalez, Melvin, et al.
Publicado: (2018)

The transcriptional coactivator RUVBL2 regulates Pol II clustering with diverse transcription factors
por: Wang, Hui, et al.
Publicado: (2022)

The Centromere: Chromatin Foundation for the Kinetochore Machinery
por: Fukagawa, Tatsuo, et al.
Publicado: (2014)

Replication and transcription machinery for ranaviruses: components, correlation, and functional architecture
por: Ke, Fei, et al.
Publicado: (2022)

Genome-wide dynamics of Pol II elongation and its interplay with promoter proximal pausing, chromatin, and exons
por: Jonkers, Iris, et al.
Publicado: (2014)

Structure and mechanism of the RNA polymerase II transcription machinery
por: Schier, Allison C., et al.
Publicado: (2020)

Subgenic Pol II interactomes identify region‐specific transcription elongation regulators
por: Harlen, Kevin M, et al.
Publicado: (2017)

Nascent RNA signaling to yeast RNA Pol II during transcription elongation
por: Klopf, Eva, et al.
Publicado: (2018)

Architecture of Pol II(G) and molecular mechanism of transcription regulation by Gdown1
por: Jishage, Miki, et al.
Publicado: (2018)

Pol II phosphorylation regulates a switch between transcriptional and splicing condensates
por: Guo, Yang Eric, et al.
Publicado: (2019)

Universal promoter scanning by Pol II during transcription initiation in Saccharomyces cerevisiae
por: Qiu, Chenxi, et al.
Publicado: (2020)

RNA Pol II pausing facilitates phased pluripotency transitions by buffering transcription
por: Abuhashem, Abderhman, et al.
Publicado: (2022)

Regulation of Pol II Pausing during Daily Gene Transcription in Mouse Liver
por: Xu, Wei, et al.
Publicado: (2023)

Human RNA Polymerase III transcriptomes and relationships to Pol II promoters, enhancer-binding factors and chromatin domains
por: Oler, Andrew J., et al.
Publicado: (2010)

Nucleus-wide analysis of coherent RNA pol II movement in the context of chromatin dynamics in living cancer cells
por: Shaban, Haitham A.
Publicado: (2022)

Combinatorial epigenetic patterns as quantitative predictors of chromatin biology
por: Cieślik, Marcin, et al.
Publicado: (2014)

Mediator is an intrinsic component of the basal RNA polymerase II machinery in vivo
por: Lacombe, Thierry, et al.
Publicado: (2013)

Cannot write session to /tmp/vufind_sessions/sess_ggl9au93cj2pl01jc2ekil9cn0