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Resolution enhancement with deblurring by pixel reassignment (DPR)
Improving the spatial resolution of a fluorescence microscope has been an ongoing challenge in the imaging community. To address this challenge, a variety of approaches have been taken, ranging from instrumentation development to image post-processing. An example of the latter is deconvolution, wher...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Cold Spring Harbor Laboratory
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10402078/ https://www.ncbi.nlm.nih.gov/pubmed/37546886 http://dx.doi.org/10.1101/2023.07.24.550382 |
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author | Zhao, Bingying Mertz, Jerome |
author_facet | Zhao, Bingying Mertz, Jerome |
author_sort | Zhao, Bingying |
collection | PubMed |
description | Improving the spatial resolution of a fluorescence microscope has been an ongoing challenge in the imaging community. To address this challenge, a variety of approaches have been taken, ranging from instrumentation development to image post-processing. An example of the latter is deconvolution, where images are numerically deblurred based on a knowledge of the microscope point spread function. However, deconvolution can easily lead to noise-amplification artifacts. Deblurring by post-processing can also lead to negativities or fail to conserve local linearity between sample and image. We describe here a simple image deblurring algorithm based on pixel reassignment that inherently avoids such artifacts and can be applied to general microscope modalities and fluorophore types. Our algorithm helps distinguish nearby fluorophores even when these are separated by distances smaller than the conventional resolution limit, helping facilitate, for example, the application of single-molecule localization microscopy in dense samples. We demonstrate the versatility and performance of our algorithm under a variety of imaging conditions. |
format | Online Article Text |
id | pubmed-10402078 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Cold Spring Harbor Laboratory |
record_format | MEDLINE/PubMed |
spelling | pubmed-104020782023-08-05 Resolution enhancement with deblurring by pixel reassignment (DPR) Zhao, Bingying Mertz, Jerome bioRxiv Article Improving the spatial resolution of a fluorescence microscope has been an ongoing challenge in the imaging community. To address this challenge, a variety of approaches have been taken, ranging from instrumentation development to image post-processing. An example of the latter is deconvolution, where images are numerically deblurred based on a knowledge of the microscope point spread function. However, deconvolution can easily lead to noise-amplification artifacts. Deblurring by post-processing can also lead to negativities or fail to conserve local linearity between sample and image. We describe here a simple image deblurring algorithm based on pixel reassignment that inherently avoids such artifacts and can be applied to general microscope modalities and fluorophore types. Our algorithm helps distinguish nearby fluorophores even when these are separated by distances smaller than the conventional resolution limit, helping facilitate, for example, the application of single-molecule localization microscopy in dense samples. We demonstrate the versatility and performance of our algorithm under a variety of imaging conditions. Cold Spring Harbor Laboratory 2023-09-16 /pmc/articles/PMC10402078/ /pubmed/37546886 http://dx.doi.org/10.1101/2023.07.24.550382 Text en https://creativecommons.org/licenses/by/4.0/This work is licensed under a Creative Commons Attribution 4.0 International License (https://creativecommons.org/licenses/by/4.0/) , which allows reusers to distribute, remix, adapt, and build upon the material in any medium or format, so long as attribution is given to the creator. The license allows for commercial use. |
spellingShingle | Article Zhao, Bingying Mertz, Jerome Resolution enhancement with deblurring by pixel reassignment (DPR) |
title | Resolution enhancement with deblurring by pixel reassignment (DPR) |
title_full | Resolution enhancement with deblurring by pixel reassignment (DPR) |
title_fullStr | Resolution enhancement with deblurring by pixel reassignment (DPR) |
title_full_unstemmed | Resolution enhancement with deblurring by pixel reassignment (DPR) |
title_short | Resolution enhancement with deblurring by pixel reassignment (DPR) |
title_sort | resolution enhancement with deblurring by pixel reassignment (dpr) |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10402078/ https://www.ncbi.nlm.nih.gov/pubmed/37546886 http://dx.doi.org/10.1101/2023.07.24.550382 |
work_keys_str_mv | AT zhaobingying resolutionenhancementwithdeblurringbypixelreassignmentdpr AT mertzjerome resolutionenhancementwithdeblurringbypixelreassignmentdpr |