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Diffusiophoresis promotes phase separation and transport of biomolecular condensates

The internal microenvironment of a living cell is heterogeneous and comprises a multitude of organelles with distinct biochemistry. Amongst them are biomolecular condensates, which are membrane-less, phase-separated compartments enriched in system-specific proteins and nucleic acids. The heterogenei...

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Autores principales: Doan, Viet Sang, Alshareedah, Ibraheem, Singh, Anurag, Banerjee, Priya R., Shin, Sangwoo
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Journal Experts 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10402192/
https://www.ncbi.nlm.nih.gov/pubmed/37546778
http://dx.doi.org/10.21203/rs.3.rs-3171749/v1
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author Doan, Viet Sang
Alshareedah, Ibraheem
Singh, Anurag
Banerjee, Priya R.
Shin, Sangwoo
author_facet Doan, Viet Sang
Alshareedah, Ibraheem
Singh, Anurag
Banerjee, Priya R.
Shin, Sangwoo
author_sort Doan, Viet Sang
collection PubMed
description The internal microenvironment of a living cell is heterogeneous and comprises a multitude of organelles with distinct biochemistry. Amongst them are biomolecular condensates, which are membrane-less, phase-separated compartments enriched in system-specific proteins and nucleic acids. The heterogeneity of the cell engenders the presence of multiple spatiotemporal gradients in chemistry, charge, concentration, temperature, and pressure. Such thermodynamic gradients can lead to non-equilibrium driving forces for the formation and transport of biomolecular condensates. Here, we report how ion gradients impact the transport processes of biomolecular condensates on the mesoscale and biomolecules on the microscale. Utilizing a microfluidic platform, we demonstrate that the presence of ion concentration gradients can accelerate the transport of biomolecules, including nucleic acids and proteins, via diffusiophoresis. This hydrodynamic transport process allows localized enrichment of biomolecules, thereby promoting the location-specific formation of biomolecular condensates via phase separation. The ion gradients further impart active motility of condensates, allowing them to exhibit enhanced diffusion along the gradient. Coupled with reentrant phase behavior, the gradient-induced active motility leads to a dynamical redistribution of condensates that ultimately extends their lifetime. Together, our results demonstrate diffusiophoresis as a non-equilibrium thermodynamic force that governs the formation and active transport of biomolecular condensates.
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spelling pubmed-104021922023-08-05 Diffusiophoresis promotes phase separation and transport of biomolecular condensates Doan, Viet Sang Alshareedah, Ibraheem Singh, Anurag Banerjee, Priya R. Shin, Sangwoo Res Sq Article The internal microenvironment of a living cell is heterogeneous and comprises a multitude of organelles with distinct biochemistry. Amongst them are biomolecular condensates, which are membrane-less, phase-separated compartments enriched in system-specific proteins and nucleic acids. The heterogeneity of the cell engenders the presence of multiple spatiotemporal gradients in chemistry, charge, concentration, temperature, and pressure. Such thermodynamic gradients can lead to non-equilibrium driving forces for the formation and transport of biomolecular condensates. Here, we report how ion gradients impact the transport processes of biomolecular condensates on the mesoscale and biomolecules on the microscale. Utilizing a microfluidic platform, we demonstrate that the presence of ion concentration gradients can accelerate the transport of biomolecules, including nucleic acids and proteins, via diffusiophoresis. This hydrodynamic transport process allows localized enrichment of biomolecules, thereby promoting the location-specific formation of biomolecular condensates via phase separation. The ion gradients further impart active motility of condensates, allowing them to exhibit enhanced diffusion along the gradient. Coupled with reentrant phase behavior, the gradient-induced active motility leads to a dynamical redistribution of condensates that ultimately extends their lifetime. Together, our results demonstrate diffusiophoresis as a non-equilibrium thermodynamic force that governs the formation and active transport of biomolecular condensates. American Journal Experts 2023-07-27 /pmc/articles/PMC10402192/ /pubmed/37546778 http://dx.doi.org/10.21203/rs.3.rs-3171749/v1 Text en https://creativecommons.org/licenses/by/4.0/This work is licensed under a Creative Commons Attribution 4.0 International License (https://creativecommons.org/licenses/by/4.0/) , which allows reusers to distribute, remix, adapt, and build upon the material in any medium or format, so long as attribution is given to the creator. The license allows for commercial use.
spellingShingle Article
Doan, Viet Sang
Alshareedah, Ibraheem
Singh, Anurag
Banerjee, Priya R.
Shin, Sangwoo
Diffusiophoresis promotes phase separation and transport of biomolecular condensates
title Diffusiophoresis promotes phase separation and transport of biomolecular condensates
title_full Diffusiophoresis promotes phase separation and transport of biomolecular condensates
title_fullStr Diffusiophoresis promotes phase separation and transport of biomolecular condensates
title_full_unstemmed Diffusiophoresis promotes phase separation and transport of biomolecular condensates
title_short Diffusiophoresis promotes phase separation and transport of biomolecular condensates
title_sort diffusiophoresis promotes phase separation and transport of biomolecular condensates
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10402192/
https://www.ncbi.nlm.nih.gov/pubmed/37546778
http://dx.doi.org/10.21203/rs.3.rs-3171749/v1
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