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Pixel-level annotated dataset of computed tomography angiography images of acute pulmonary embolism

Pulmonary embolism has a high incidence and mortality, especially if undiagnosed. The examination of choice for diagnosing the disease is computed tomography pulmonary angiography. As many factors can lead to misinterpretations and diagnostic errors, different groups are utilizing deep learning meth...

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Autores principales: de Andrade, João Mario Clementin, Olescki, Gabriel, Escuissato, Dante Luiz, Oliveira, Lucas Ferrari, Basso, Ana Carolina Nicolleti, Salvador, Gabriel Lucca
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10403591/
https://www.ncbi.nlm.nih.gov/pubmed/37542053
http://dx.doi.org/10.1038/s41597-023-02374-x
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author de Andrade, João Mario Clementin
Olescki, Gabriel
Escuissato, Dante Luiz
Oliveira, Lucas Ferrari
Basso, Ana Carolina Nicolleti
Salvador, Gabriel Lucca
author_facet de Andrade, João Mario Clementin
Olescki, Gabriel
Escuissato, Dante Luiz
Oliveira, Lucas Ferrari
Basso, Ana Carolina Nicolleti
Salvador, Gabriel Lucca
author_sort de Andrade, João Mario Clementin
collection PubMed
description Pulmonary embolism has a high incidence and mortality, especially if undiagnosed. The examination of choice for diagnosing the disease is computed tomography pulmonary angiography. As many factors can lead to misinterpretations and diagnostic errors, different groups are utilizing deep learning methods to help improve this process. The diagnostic accuracy of these methods tends to increase by augmenting the training dataset. Deep learning methods can potentially benefit from the use of images acquired with devices from different vendors. To the best of our knowledge, we have developed the first public dataset annotated at the pixel and image levels and the first pixel-level annotated dataset to contain examinations performed with equipment from Toshiba and GE. This dataset includes 40 examinations, half performed with each piece of equipment, representing samples from two medical services. We also included measurements related to the cardiac and circulatory consequences of pulmonary embolism. We encourage the use of this dataset to develop, evaluate and compare the performance of new AI algorithms designed to diagnose PE.
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spelling pubmed-104035912023-08-06 Pixel-level annotated dataset of computed tomography angiography images of acute pulmonary embolism de Andrade, João Mario Clementin Olescki, Gabriel Escuissato, Dante Luiz Oliveira, Lucas Ferrari Basso, Ana Carolina Nicolleti Salvador, Gabriel Lucca Sci Data Data Descriptor Pulmonary embolism has a high incidence and mortality, especially if undiagnosed. The examination of choice for diagnosing the disease is computed tomography pulmonary angiography. As many factors can lead to misinterpretations and diagnostic errors, different groups are utilizing deep learning methods to help improve this process. The diagnostic accuracy of these methods tends to increase by augmenting the training dataset. Deep learning methods can potentially benefit from the use of images acquired with devices from different vendors. To the best of our knowledge, we have developed the first public dataset annotated at the pixel and image levels and the first pixel-level annotated dataset to contain examinations performed with equipment from Toshiba and GE. This dataset includes 40 examinations, half performed with each piece of equipment, representing samples from two medical services. We also included measurements related to the cardiac and circulatory consequences of pulmonary embolism. We encourage the use of this dataset to develop, evaluate and compare the performance of new AI algorithms designed to diagnose PE. Nature Publishing Group UK 2023-08-04 /pmc/articles/PMC10403591/ /pubmed/37542053 http://dx.doi.org/10.1038/s41597-023-02374-x Text en © The Author(s) 2023 https://creativecommons.org/licenses/by/4.0/Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ (https://creativecommons.org/licenses/by/4.0/) .
spellingShingle Data Descriptor
de Andrade, João Mario Clementin
Olescki, Gabriel
Escuissato, Dante Luiz
Oliveira, Lucas Ferrari
Basso, Ana Carolina Nicolleti
Salvador, Gabriel Lucca
Pixel-level annotated dataset of computed tomography angiography images of acute pulmonary embolism
title Pixel-level annotated dataset of computed tomography angiography images of acute pulmonary embolism
title_full Pixel-level annotated dataset of computed tomography angiography images of acute pulmonary embolism
title_fullStr Pixel-level annotated dataset of computed tomography angiography images of acute pulmonary embolism
title_full_unstemmed Pixel-level annotated dataset of computed tomography angiography images of acute pulmonary embolism
title_short Pixel-level annotated dataset of computed tomography angiography images of acute pulmonary embolism
title_sort pixel-level annotated dataset of computed tomography angiography images of acute pulmonary embolism
topic Data Descriptor
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10403591/
https://www.ncbi.nlm.nih.gov/pubmed/37542053
http://dx.doi.org/10.1038/s41597-023-02374-x
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