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Mitochondrial genome datasets for the sweetpotato weevil, Cylas formicarius elegantulus (Coleoptera: Brentidae), collected in the United States

The sweetpotato weevil, Cylas formicarius elegantulus (Summers) (Coleoptera: Brentidae), is one of the most destructive pests of sweetpotato worldwide. Genomic analyses of sweetpotato weevils can provide insights into their genetic diversity, population structure, and dispersal as well as provide in...

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Autores principales: Andreason, Sharon A., Lahey, Zachary, Zhao, Dongyan, Mejia-Guerra, Katherine, Williams, Livy H., Sheehan, Moira, Simmons, Alvin M., Wadl, Phillip A.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10403706/
https://www.ncbi.nlm.nih.gov/pubmed/37547168
http://dx.doi.org/10.1016/j.dib.2023.109432
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author Andreason, Sharon A.
Lahey, Zachary
Zhao, Dongyan
Mejia-Guerra, Katherine
Williams, Livy H.
Sheehan, Moira
Simmons, Alvin M.
Wadl, Phillip A.
author_facet Andreason, Sharon A.
Lahey, Zachary
Zhao, Dongyan
Mejia-Guerra, Katherine
Williams, Livy H.
Sheehan, Moira
Simmons, Alvin M.
Wadl, Phillip A.
author_sort Andreason, Sharon A.
collection PubMed
description The sweetpotato weevil, Cylas formicarius elegantulus (Summers) (Coleoptera: Brentidae), is one of the most destructive pests of sweetpotato worldwide. Genomic analyses of sweetpotato weevils can provide insights into their genetic diversity, population structure, and dispersal as well as provide information to support management strategies. Adult sweetpotato weevils were collected by various methods from Ipomoea batatas L. (sweetpotato) or I. coccinea L. (red morning glory) in the U.S. states of Georgia, Hawaii, South Carolina, and Texas. Genomic DNA was extracted from individual weevil specimens and sequenced using Illumina NovaSeq. A total of 181 GB of 150 base pair (bp) paired-end reads were generated for 40 specimens. Mitochondrial genomes were assembled for each specimen via reference mapping and annotated using Geneious Prime. Full mitochondrial genome sequences range from 17,141 to 17,152 bp with an average GC content of 21.8% and average coverage of 3307 × . A maximum likelihood phylogenetic analysis considering the mitochondrial protein coding genes is provided. Mitochondrial genomes and assembled reads are deposited in NCBI GenBank, providing 40 mitogenomes of C. formicarius elegantulus collected in the U.S.
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spelling pubmed-104037062023-08-06 Mitochondrial genome datasets for the sweetpotato weevil, Cylas formicarius elegantulus (Coleoptera: Brentidae), collected in the United States Andreason, Sharon A. Lahey, Zachary Zhao, Dongyan Mejia-Guerra, Katherine Williams, Livy H. Sheehan, Moira Simmons, Alvin M. Wadl, Phillip A. Data Brief Data Article The sweetpotato weevil, Cylas formicarius elegantulus (Summers) (Coleoptera: Brentidae), is one of the most destructive pests of sweetpotato worldwide. Genomic analyses of sweetpotato weevils can provide insights into their genetic diversity, population structure, and dispersal as well as provide information to support management strategies. Adult sweetpotato weevils were collected by various methods from Ipomoea batatas L. (sweetpotato) or I. coccinea L. (red morning glory) in the U.S. states of Georgia, Hawaii, South Carolina, and Texas. Genomic DNA was extracted from individual weevil specimens and sequenced using Illumina NovaSeq. A total of 181 GB of 150 base pair (bp) paired-end reads were generated for 40 specimens. Mitochondrial genomes were assembled for each specimen via reference mapping and annotated using Geneious Prime. Full mitochondrial genome sequences range from 17,141 to 17,152 bp with an average GC content of 21.8% and average coverage of 3307 × . A maximum likelihood phylogenetic analysis considering the mitochondrial protein coding genes is provided. Mitochondrial genomes and assembled reads are deposited in NCBI GenBank, providing 40 mitogenomes of C. formicarius elegantulus collected in the U.S. Elsevier 2023-07-21 /pmc/articles/PMC10403706/ /pubmed/37547168 http://dx.doi.org/10.1016/j.dib.2023.109432 Text en https://creativecommons.org/licenses/by/4.0/This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Data Article
Andreason, Sharon A.
Lahey, Zachary
Zhao, Dongyan
Mejia-Guerra, Katherine
Williams, Livy H.
Sheehan, Moira
Simmons, Alvin M.
Wadl, Phillip A.
Mitochondrial genome datasets for the sweetpotato weevil, Cylas formicarius elegantulus (Coleoptera: Brentidae), collected in the United States
title Mitochondrial genome datasets for the sweetpotato weevil, Cylas formicarius elegantulus (Coleoptera: Brentidae), collected in the United States
title_full Mitochondrial genome datasets for the sweetpotato weevil, Cylas formicarius elegantulus (Coleoptera: Brentidae), collected in the United States
title_fullStr Mitochondrial genome datasets for the sweetpotato weevil, Cylas formicarius elegantulus (Coleoptera: Brentidae), collected in the United States
title_full_unstemmed Mitochondrial genome datasets for the sweetpotato weevil, Cylas formicarius elegantulus (Coleoptera: Brentidae), collected in the United States
title_short Mitochondrial genome datasets for the sweetpotato weevil, Cylas formicarius elegantulus (Coleoptera: Brentidae), collected in the United States
title_sort mitochondrial genome datasets for the sweetpotato weevil, cylas formicarius elegantulus (coleoptera: brentidae), collected in the united states
topic Data Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10403706/
https://www.ncbi.nlm.nih.gov/pubmed/37547168
http://dx.doi.org/10.1016/j.dib.2023.109432
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