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Advanced modeling and optimizing for surface sterilization process of grape vine (Vitis vinifera) root stock 3309C through response surface, artificial neural network, and genetic algorithm techniques

In vitro, sterilization is one of the key components for proceeding with plant tissue cultures. Since the effectiveness of sterilization has a direct impact on the culture's final outcomes, there is a crucial need for optimization of the sterilization process. However, compared with traditional...

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Autores principales: Dagne, Habtamu, S, Venkatesa Prabhu, Palanivel, Hemalatha, Yeshitila, Alazar, Benor, Solomon, Abera, Solomon, Abdi, Adugna
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2023
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10404695/
https://www.ncbi.nlm.nih.gov/pubmed/37554794
http://dx.doi.org/10.1016/j.heliyon.2023.e18628
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author Dagne, Habtamu
S, Venkatesa Prabhu
Palanivel, Hemalatha
Yeshitila, Alazar
Benor, Solomon
Abera, Solomon
Abdi, Adugna
author_facet Dagne, Habtamu
S, Venkatesa Prabhu
Palanivel, Hemalatha
Yeshitila, Alazar
Benor, Solomon
Abera, Solomon
Abdi, Adugna
author_sort Dagne, Habtamu
collection PubMed
description In vitro, sterilization is one of the key components for proceeding with plant tissue cultures. Since the effectiveness of sterilization has a direct impact on the culture's final outcomes, there is a crucial need for optimization of the sterilization process. However, compared with traditional optimizing methods, the use of computational approaches through artificial intelligence-based process modeling and optimization algorithms provides a precise optimal condition for in vitro culturing. This study aimed to optimise in vitro sterilization of grape rootstock 3309C using RSM, ANN, and genetic algorithm (GA) techniques. In this context, two output responses, namely, Clean Culture and Explant Viability, were optimised using the models developed by RSM and ANN, followed by a GA, to obtain a globally optimal solution. The most influential independent factors, such as HgCl(2), NaOCl, AgNO(3), and immersion time, were considered input variables. The significance of the developed models was investigated with statistical and non-statistical techniques and was optimised to determine the significance of selected inputs. The optimal clean culture of 91%, and the explant viability of 89% can be obtained from 1.62% NaOCl at a 13.96 min immersion time, according to MLP-NSGAII. Sensitivity analysis revealed that the clean culture and explant viability were less sensitive to AgNO(3) and more sensitive to immersion time. Results showed that the differences between the GA predicted and validation data were significant after the performance validation of predicted and optimised sterilising agents with immersion time combinations were tested. In general, GA, a potent methodology, may open the door to the development of new computational methods in plant tissue culture.
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spelling pubmed-104046952023-08-08 Advanced modeling and optimizing for surface sterilization process of grape vine (Vitis vinifera) root stock 3309C through response surface, artificial neural network, and genetic algorithm techniques Dagne, Habtamu S, Venkatesa Prabhu Palanivel, Hemalatha Yeshitila, Alazar Benor, Solomon Abera, Solomon Abdi, Adugna Heliyon Research Article In vitro, sterilization is one of the key components for proceeding with plant tissue cultures. Since the effectiveness of sterilization has a direct impact on the culture's final outcomes, there is a crucial need for optimization of the sterilization process. However, compared with traditional optimizing methods, the use of computational approaches through artificial intelligence-based process modeling and optimization algorithms provides a precise optimal condition for in vitro culturing. This study aimed to optimise in vitro sterilization of grape rootstock 3309C using RSM, ANN, and genetic algorithm (GA) techniques. In this context, two output responses, namely, Clean Culture and Explant Viability, were optimised using the models developed by RSM and ANN, followed by a GA, to obtain a globally optimal solution. The most influential independent factors, such as HgCl(2), NaOCl, AgNO(3), and immersion time, were considered input variables. The significance of the developed models was investigated with statistical and non-statistical techniques and was optimised to determine the significance of selected inputs. The optimal clean culture of 91%, and the explant viability of 89% can be obtained from 1.62% NaOCl at a 13.96 min immersion time, according to MLP-NSGAII. Sensitivity analysis revealed that the clean culture and explant viability were less sensitive to AgNO(3) and more sensitive to immersion time. Results showed that the differences between the GA predicted and validation data were significant after the performance validation of predicted and optimised sterilising agents with immersion time combinations were tested. In general, GA, a potent methodology, may open the door to the development of new computational methods in plant tissue culture. Elsevier 2023-07-25 /pmc/articles/PMC10404695/ /pubmed/37554794 http://dx.doi.org/10.1016/j.heliyon.2023.e18628 Text en © 2023 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Research Article
Dagne, Habtamu
S, Venkatesa Prabhu
Palanivel, Hemalatha
Yeshitila, Alazar
Benor, Solomon
Abera, Solomon
Abdi, Adugna
Advanced modeling and optimizing for surface sterilization process of grape vine (Vitis vinifera) root stock 3309C through response surface, artificial neural network, and genetic algorithm techniques
title Advanced modeling and optimizing for surface sterilization process of grape vine (Vitis vinifera) root stock 3309C through response surface, artificial neural network, and genetic algorithm techniques
title_full Advanced modeling and optimizing for surface sterilization process of grape vine (Vitis vinifera) root stock 3309C through response surface, artificial neural network, and genetic algorithm techniques
title_fullStr Advanced modeling and optimizing for surface sterilization process of grape vine (Vitis vinifera) root stock 3309C through response surface, artificial neural network, and genetic algorithm techniques
title_full_unstemmed Advanced modeling and optimizing for surface sterilization process of grape vine (Vitis vinifera) root stock 3309C through response surface, artificial neural network, and genetic algorithm techniques
title_short Advanced modeling and optimizing for surface sterilization process of grape vine (Vitis vinifera) root stock 3309C through response surface, artificial neural network, and genetic algorithm techniques
title_sort advanced modeling and optimizing for surface sterilization process of grape vine (vitis vinifera) root stock 3309c through response surface, artificial neural network, and genetic algorithm techniques
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10404695/
https://www.ncbi.nlm.nih.gov/pubmed/37554794
http://dx.doi.org/10.1016/j.heliyon.2023.e18628
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