Cargando…
Advanced modeling and optimizing for surface sterilization process of grape vine (Vitis vinifera) root stock 3309C through response surface, artificial neural network, and genetic algorithm techniques
In vitro, sterilization is one of the key components for proceeding with plant tissue cultures. Since the effectiveness of sterilization has a direct impact on the culture's final outcomes, there is a crucial need for optimization of the sterilization process. However, compared with traditional...
Autores principales: | , , , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2023
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10404695/ https://www.ncbi.nlm.nih.gov/pubmed/37554794 http://dx.doi.org/10.1016/j.heliyon.2023.e18628 |
_version_ | 1785085354027515904 |
---|---|
author | Dagne, Habtamu S, Venkatesa Prabhu Palanivel, Hemalatha Yeshitila, Alazar Benor, Solomon Abera, Solomon Abdi, Adugna |
author_facet | Dagne, Habtamu S, Venkatesa Prabhu Palanivel, Hemalatha Yeshitila, Alazar Benor, Solomon Abera, Solomon Abdi, Adugna |
author_sort | Dagne, Habtamu |
collection | PubMed |
description | In vitro, sterilization is one of the key components for proceeding with plant tissue cultures. Since the effectiveness of sterilization has a direct impact on the culture's final outcomes, there is a crucial need for optimization of the sterilization process. However, compared with traditional optimizing methods, the use of computational approaches through artificial intelligence-based process modeling and optimization algorithms provides a precise optimal condition for in vitro culturing. This study aimed to optimise in vitro sterilization of grape rootstock 3309C using RSM, ANN, and genetic algorithm (GA) techniques. In this context, two output responses, namely, Clean Culture and Explant Viability, were optimised using the models developed by RSM and ANN, followed by a GA, to obtain a globally optimal solution. The most influential independent factors, such as HgCl(2), NaOCl, AgNO(3), and immersion time, were considered input variables. The significance of the developed models was investigated with statistical and non-statistical techniques and was optimised to determine the significance of selected inputs. The optimal clean culture of 91%, and the explant viability of 89% can be obtained from 1.62% NaOCl at a 13.96 min immersion time, according to MLP-NSGAII. Sensitivity analysis revealed that the clean culture and explant viability were less sensitive to AgNO(3) and more sensitive to immersion time. Results showed that the differences between the GA predicted and validation data were significant after the performance validation of predicted and optimised sterilising agents with immersion time combinations were tested. In general, GA, a potent methodology, may open the door to the development of new computational methods in plant tissue culture. |
format | Online Article Text |
id | pubmed-10404695 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-104046952023-08-08 Advanced modeling and optimizing for surface sterilization process of grape vine (Vitis vinifera) root stock 3309C through response surface, artificial neural network, and genetic algorithm techniques Dagne, Habtamu S, Venkatesa Prabhu Palanivel, Hemalatha Yeshitila, Alazar Benor, Solomon Abera, Solomon Abdi, Adugna Heliyon Research Article In vitro, sterilization is one of the key components for proceeding with plant tissue cultures. Since the effectiveness of sterilization has a direct impact on the culture's final outcomes, there is a crucial need for optimization of the sterilization process. However, compared with traditional optimizing methods, the use of computational approaches through artificial intelligence-based process modeling and optimization algorithms provides a precise optimal condition for in vitro culturing. This study aimed to optimise in vitro sterilization of grape rootstock 3309C using RSM, ANN, and genetic algorithm (GA) techniques. In this context, two output responses, namely, Clean Culture and Explant Viability, were optimised using the models developed by RSM and ANN, followed by a GA, to obtain a globally optimal solution. The most influential independent factors, such as HgCl(2), NaOCl, AgNO(3), and immersion time, were considered input variables. The significance of the developed models was investigated with statistical and non-statistical techniques and was optimised to determine the significance of selected inputs. The optimal clean culture of 91%, and the explant viability of 89% can be obtained from 1.62% NaOCl at a 13.96 min immersion time, according to MLP-NSGAII. Sensitivity analysis revealed that the clean culture and explant viability were less sensitive to AgNO(3) and more sensitive to immersion time. Results showed that the differences between the GA predicted and validation data were significant after the performance validation of predicted and optimised sterilising agents with immersion time combinations were tested. In general, GA, a potent methodology, may open the door to the development of new computational methods in plant tissue culture. Elsevier 2023-07-25 /pmc/articles/PMC10404695/ /pubmed/37554794 http://dx.doi.org/10.1016/j.heliyon.2023.e18628 Text en © 2023 The Authors https://creativecommons.org/licenses/by-nc-nd/4.0/This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Research Article Dagne, Habtamu S, Venkatesa Prabhu Palanivel, Hemalatha Yeshitila, Alazar Benor, Solomon Abera, Solomon Abdi, Adugna Advanced modeling and optimizing for surface sterilization process of grape vine (Vitis vinifera) root stock 3309C through response surface, artificial neural network, and genetic algorithm techniques |
title | Advanced modeling and optimizing for surface sterilization process of grape vine (Vitis vinifera) root stock 3309C through response surface, artificial neural network, and genetic algorithm techniques |
title_full | Advanced modeling and optimizing for surface sterilization process of grape vine (Vitis vinifera) root stock 3309C through response surface, artificial neural network, and genetic algorithm techniques |
title_fullStr | Advanced modeling and optimizing for surface sterilization process of grape vine (Vitis vinifera) root stock 3309C through response surface, artificial neural network, and genetic algorithm techniques |
title_full_unstemmed | Advanced modeling and optimizing for surface sterilization process of grape vine (Vitis vinifera) root stock 3309C through response surface, artificial neural network, and genetic algorithm techniques |
title_short | Advanced modeling and optimizing for surface sterilization process of grape vine (Vitis vinifera) root stock 3309C through response surface, artificial neural network, and genetic algorithm techniques |
title_sort | advanced modeling and optimizing for surface sterilization process of grape vine (vitis vinifera) root stock 3309c through response surface, artificial neural network, and genetic algorithm techniques |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10404695/ https://www.ncbi.nlm.nih.gov/pubmed/37554794 http://dx.doi.org/10.1016/j.heliyon.2023.e18628 |
work_keys_str_mv | AT dagnehabtamu advancedmodelingandoptimizingforsurfacesterilizationprocessofgrapevinevitisviniferarootstock3309cthroughresponsesurfaceartificialneuralnetworkandgeneticalgorithmtechniques AT svenkatesaprabhu advancedmodelingandoptimizingforsurfacesterilizationprocessofgrapevinevitisviniferarootstock3309cthroughresponsesurfaceartificialneuralnetworkandgeneticalgorithmtechniques AT palanivelhemalatha advancedmodelingandoptimizingforsurfacesterilizationprocessofgrapevinevitisviniferarootstock3309cthroughresponsesurfaceartificialneuralnetworkandgeneticalgorithmtechniques AT yeshitilaalazar advancedmodelingandoptimizingforsurfacesterilizationprocessofgrapevinevitisviniferarootstock3309cthroughresponsesurfaceartificialneuralnetworkandgeneticalgorithmtechniques AT benorsolomon advancedmodelingandoptimizingforsurfacesterilizationprocessofgrapevinevitisviniferarootstock3309cthroughresponsesurfaceartificialneuralnetworkandgeneticalgorithmtechniques AT aberasolomon advancedmodelingandoptimizingforsurfacesterilizationprocessofgrapevinevitisviniferarootstock3309cthroughresponsesurfaceartificialneuralnetworkandgeneticalgorithmtechniques AT abdiadugna advancedmodelingandoptimizingforsurfacesterilizationprocessofgrapevinevitisviniferarootstock3309cthroughresponsesurfaceartificialneuralnetworkandgeneticalgorithmtechniques |