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Tautomerization of H(+)KPGG: Entropic Consequences of Strong Hydrogen-Bond Networks in Peptides

[Image: see text] Ion mobility spectrometry-mass spectrometry and quantum chemical calculations are used to determine the structures and stabilities of the singly protonated peptide H(+)KPGG. The two peaks making up the IMS distribution are shown to be tautomers differing by the location of the extr...

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Autores principales: Beckett, Daniel, El-Baba, Tarick J., Zhang, Zhichao, Clemmer, David E., Raghavachari, Krishnan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: American Chemical Society 2023
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10405267/
https://www.ncbi.nlm.nih.gov/pubmed/37490716
http://dx.doi.org/10.1021/acs.jpca.3c03744
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author Beckett, Daniel
El-Baba, Tarick J.
Zhang, Zhichao
Clemmer, David E.
Raghavachari, Krishnan
author_facet Beckett, Daniel
El-Baba, Tarick J.
Zhang, Zhichao
Clemmer, David E.
Raghavachari, Krishnan
author_sort Beckett, Daniel
collection PubMed
description [Image: see text] Ion mobility spectrometry-mass spectrometry and quantum chemical calculations are used to determine the structures and stabilities of the singly protonated peptide H(+)KPGG. The two peaks making up the IMS distribution are shown to be tautomers differing by the location of the extra proton on either the lysine side chain or the N-terminus. The lysine-protonated tautomer is strongly preferred entropically while being disfavored in terms of the electronic energy and enthalpy. This relationship is shown, through comparison of all low-lying conformers of both tautomers, to be related to the strong hydrogen-bond network of the N-terminally protonated tautomer. A general relationship is demonstrated wherein stronger cross-peptide hydrogen-bond networks result in entropically disfavored conformers. Further effects of the H(+)KPGG hydrogen-bond network are probed by computationally examining singly and doubly methylated analogues. These results demonstrate the importance of the entropic consequences of hydrogen bonds to peptide stability as well as techniques for perturbing the hydrogen-bond network and folding preferences of peptides via minimal chemical modification.
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spelling pubmed-104052672023-08-08 Tautomerization of H(+)KPGG: Entropic Consequences of Strong Hydrogen-Bond Networks in Peptides Beckett, Daniel El-Baba, Tarick J. Zhang, Zhichao Clemmer, David E. Raghavachari, Krishnan J Phys Chem A [Image: see text] Ion mobility spectrometry-mass spectrometry and quantum chemical calculations are used to determine the structures and stabilities of the singly protonated peptide H(+)KPGG. The two peaks making up the IMS distribution are shown to be tautomers differing by the location of the extra proton on either the lysine side chain or the N-terminus. The lysine-protonated tautomer is strongly preferred entropically while being disfavored in terms of the electronic energy and enthalpy. This relationship is shown, through comparison of all low-lying conformers of both tautomers, to be related to the strong hydrogen-bond network of the N-terminally protonated tautomer. A general relationship is demonstrated wherein stronger cross-peptide hydrogen-bond networks result in entropically disfavored conformers. Further effects of the H(+)KPGG hydrogen-bond network are probed by computationally examining singly and doubly methylated analogues. These results demonstrate the importance of the entropic consequences of hydrogen bonds to peptide stability as well as techniques for perturbing the hydrogen-bond network and folding preferences of peptides via minimal chemical modification. American Chemical Society 2023-07-25 /pmc/articles/PMC10405267/ /pubmed/37490716 http://dx.doi.org/10.1021/acs.jpca.3c03744 Text en © 2023 The Authors. Published by American Chemical Society https://creativecommons.org/licenses/by/4.0/Permits the broadest form of re-use including for commercial purposes, provided that author attribution and integrity are maintained (https://creativecommons.org/licenses/by/4.0/).
spellingShingle Beckett, Daniel
El-Baba, Tarick J.
Zhang, Zhichao
Clemmer, David E.
Raghavachari, Krishnan
Tautomerization of H(+)KPGG: Entropic Consequences of Strong Hydrogen-Bond Networks in Peptides
title Tautomerization of H(+)KPGG: Entropic Consequences of Strong Hydrogen-Bond Networks in Peptides
title_full Tautomerization of H(+)KPGG: Entropic Consequences of Strong Hydrogen-Bond Networks in Peptides
title_fullStr Tautomerization of H(+)KPGG: Entropic Consequences of Strong Hydrogen-Bond Networks in Peptides
title_full_unstemmed Tautomerization of H(+)KPGG: Entropic Consequences of Strong Hydrogen-Bond Networks in Peptides
title_short Tautomerization of H(+)KPGG: Entropic Consequences of Strong Hydrogen-Bond Networks in Peptides
title_sort tautomerization of h(+)kpgg: entropic consequences of strong hydrogen-bond networks in peptides
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10405267/
https://www.ncbi.nlm.nih.gov/pubmed/37490716
http://dx.doi.org/10.1021/acs.jpca.3c03744
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