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Increasing Information Content and Diagnosability in Family-Level Classifications
Higher-level classifications often must account for monotypic taxa representing depauperate evolutionary lineages and lacking synapomorphies of their better-known, well-defined sister clades. In a ranked (Linnean) or unranked (phylogenetic) classification system, discovering such a depauperate taxon...
Autores principales: | , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2023
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10405354/ https://www.ncbi.nlm.nih.gov/pubmed/37161751 http://dx.doi.org/10.1093/sysbio/syad021 |
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author | Kuntner, Matjaž Čandek, Klemen Gregorič, Matjaž Turk, Eva Hamilton, Chris A Chamberland, Lisa Starrett, James Cheng, Ren-Chung Coddington, Jonathan A Agnarsson, Ingi Bond, Jason E |
author_facet | Kuntner, Matjaž Čandek, Klemen Gregorič, Matjaž Turk, Eva Hamilton, Chris A Chamberland, Lisa Starrett, James Cheng, Ren-Chung Coddington, Jonathan A Agnarsson, Ingi Bond, Jason E |
author_sort | Kuntner, Matjaž |
collection | PubMed |
description | Higher-level classifications often must account for monotypic taxa representing depauperate evolutionary lineages and lacking synapomorphies of their better-known, well-defined sister clades. In a ranked (Linnean) or unranked (phylogenetic) classification system, discovering such a depauperate taxon does not necessarily invalidate the rank classification of sister clades. Named higher taxa must be monophyletic to be phylogenetically valid. Ranked taxa above the species level should also maximize information content, diagnosability, and utility (e.g., in biodiversity conservation). In spider classification, families are the highest rank that is systematically catalogued, and incertae sedis is not allowed. Consequently, it is important that family-level taxa be well defined and informative. We revisit the classification problem of Orbipurae, an unranked suprafamilial clade containing the spider families Nephilidae, Phonognathidae, and Araneidae sensu stricto. We argue that, to maximize diagnosability, information content, conservation utility, and practical taxonomic considerations, this “splitting” scheme is superior to its recently proposed alternative, which lumps these families together as Araneidae sensu lato. We propose to redefine Araneidae and recognize a monogeneric spider family, Paraplectanoididae fam. nov. to accommodate the depauperate lineage Paraplectanoides. We present new subgenomic data to stabilize Orbipurae topology which also supports our proposed family-level classification. Our example from spiders demonstrates why classifications must be able to accommodate depauperate evolutionary lineages, for example, Paraplectanoides. Finally, although clade age should not be a criterion to determine rank, other things being equal, comparable ages of similarly ranked taxa do benefit comparative biology. [Classification, family rank, phylogenomics, systematics, monophyly, spider phylogeny.] |
format | Online Article Text |
id | pubmed-10405354 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2023 |
publisher | Oxford University Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-104053542023-08-08 Increasing Information Content and Diagnosability in Family-Level Classifications Kuntner, Matjaž Čandek, Klemen Gregorič, Matjaž Turk, Eva Hamilton, Chris A Chamberland, Lisa Starrett, James Cheng, Ren-Chung Coddington, Jonathan A Agnarsson, Ingi Bond, Jason E Syst Biol Point of Views Higher-level classifications often must account for monotypic taxa representing depauperate evolutionary lineages and lacking synapomorphies of their better-known, well-defined sister clades. In a ranked (Linnean) or unranked (phylogenetic) classification system, discovering such a depauperate taxon does not necessarily invalidate the rank classification of sister clades. Named higher taxa must be monophyletic to be phylogenetically valid. Ranked taxa above the species level should also maximize information content, diagnosability, and utility (e.g., in biodiversity conservation). In spider classification, families are the highest rank that is systematically catalogued, and incertae sedis is not allowed. Consequently, it is important that family-level taxa be well defined and informative. We revisit the classification problem of Orbipurae, an unranked suprafamilial clade containing the spider families Nephilidae, Phonognathidae, and Araneidae sensu stricto. We argue that, to maximize diagnosability, information content, conservation utility, and practical taxonomic considerations, this “splitting” scheme is superior to its recently proposed alternative, which lumps these families together as Araneidae sensu lato. We propose to redefine Araneidae and recognize a monogeneric spider family, Paraplectanoididae fam. nov. to accommodate the depauperate lineage Paraplectanoides. We present new subgenomic data to stabilize Orbipurae topology which also supports our proposed family-level classification. Our example from spiders demonstrates why classifications must be able to accommodate depauperate evolutionary lineages, for example, Paraplectanoides. Finally, although clade age should not be a criterion to determine rank, other things being equal, comparable ages of similarly ranked taxa do benefit comparative biology. [Classification, family rank, phylogenomics, systematics, monophyly, spider phylogeny.] Oxford University Press 2023-05-10 /pmc/articles/PMC10405354/ /pubmed/37161751 http://dx.doi.org/10.1093/sysbio/syad021 Text en © The Author(s) 2023. Published by Oxford University Press on behalf of the Society of Systematic Biologists. https://creativecommons.org/licenses/by-nc/4.0/This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial License (https://creativecommons.org/licenses/by-nc/4.0/), which permits non-commercial re-use, distribution, and reproduction in any medium, provided the original work is properly cited. For commercial re-use, please contact journals.permissions@oup.com |
spellingShingle | Point of Views Kuntner, Matjaž Čandek, Klemen Gregorič, Matjaž Turk, Eva Hamilton, Chris A Chamberland, Lisa Starrett, James Cheng, Ren-Chung Coddington, Jonathan A Agnarsson, Ingi Bond, Jason E Increasing Information Content and Diagnosability in Family-Level Classifications |
title | Increasing Information Content and Diagnosability in Family-Level Classifications |
title_full | Increasing Information Content and Diagnosability in Family-Level Classifications |
title_fullStr | Increasing Information Content and Diagnosability in Family-Level Classifications |
title_full_unstemmed | Increasing Information Content and Diagnosability in Family-Level Classifications |
title_short | Increasing Information Content and Diagnosability in Family-Level Classifications |
title_sort | increasing information content and diagnosability in family-level classifications |
topic | Point of Views |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10405354/ https://www.ncbi.nlm.nih.gov/pubmed/37161751 http://dx.doi.org/10.1093/sysbio/syad021 |
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